Gene omics information

Query gene ID At2g02120
Gene name PDF2.1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g02120814743PDF2.1Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.S.X.H.G.
0.9496.7At4g31830829312unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9496.7At1g05510837053-Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
0.9396.4At1g14950838060major latex protein-related / MLP-relatedF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.9296.0At1g73190843653TIP3Moves to the Protein Storage Vacuole in a Golgi independent mannerS.X.H.G.
0.9296.0At2g28490817397cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;BMPOFVAS.X.H.G.
0.9296.0At3g22640821835PAP85F:nutrient reservoir activity;P:biological_process unknown;C:plant-type cell wall;POMS.X.H.G.
0.9195.6At5g54740835563protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding, nutrient reservoir activity;P:lipid transport, pollen development;C:endomembrane system;POS.X.H.G.
0.9195.6At5g45690834608unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFS.X.H.G.
0.9195.6At5g50600835129AtHSD1 (hydroxysteroid dehydrogenase 1)F:oxidoreductase activity, binding, catalytic activity;P:response to brassinosteroid stimulus, response to abscisic acid stimulus;C:endomembrane system;BOMFPAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
222.6100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
208.2100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
187.2100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
168.6100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
160.699.9GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
151.399.9GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
146.499.9GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
144.599.9GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
140.699.9GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
134.999.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.889e-64242At2g02100814741LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.C.G.S.X.
0.862e-40165At2g02130814744LCR68 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.C.G.S.X.
0.162e-652At1g61070842399LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.C.G.S.X.
0.141e-446At2g02140814745LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.C.G.S.X.
0.044e-134At3g15810820824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.002e+032At5g24350832505-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBC.G.S.X.
0.002e+032At5g40820834082ATRAD3Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.C.G.S.X.
0.022e+032At5g06170830504ATSUC9 (Sucrose-proton symporter 9)sucrose symporter with hight affinity for sucrose (K0.5=0.066 +/- 0.025mM), that can also transport a wide range of glucosides.C.G.S.X.
0.012e+032At2g01820814713leucine-rich repeat protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:pollen development;C:plasma membrane, plant-type cell wall;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-136Glycine maxGma.4235.1.S1_s_atU12150.1protease inhibitor-3e-4At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)C.G.S.X.
0.053e+030Hordeum vulgareHB30J05r_atHB30J05r--7e-1At5g10480PAS2 (PASTICCINO 2)C.G.S.X.
0.128e-134Oryza sativaOs02g0629800AK121915.1-Cp-thionin1e-3At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)C.G.S.X.
0.079e+030Populus trichocarpaPtpAffx.219627.1.S1_atpmrna35589hypothetical protein-5e+0At2g02140LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72)C.G.S.X.
0.112e+032Triticum aestivumTa.355.1.S1_atBQ804264--3e-1At3g12660FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)C.G.S.X.
0.071e-444Vitis vinifera1608412_atCB913843hypothetical protein LOC100242603-5e-3At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)C.G.S.X.
0.021e+128Zea maysZm.17907.1.S1_atCF002848--5e-1At4g31860protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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