Gene omics information

Query gene ID At2g01780
Gene name S-locus glycoprotein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g01780814709S-locus glycoprotein, putativeF:sugar binding;P:recognition of pollen;C:cellular_component unknown;PS.X.H.G.
0.9396.4At3g46390823789unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9296.0At2g25990817140unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.9195.6At2g05500815099unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At1g33000840195transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.9195.6At1g59535842244unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9095.1At1g65170842824ubiquitin carboxyl-terminal hydrolase family proteinF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PMOS.X.H.G.
0.8894.0At2g05870815139transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.8793.5At1g67270843047-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBS.X.H.G.
0.8491.9At2g05950815148transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
319.8100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
301.3100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
248.9100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
241.5100.0E-MEXP-509-raw-cel-829148201
234.3100.0E-MEXP-509-raw-cel-829148561
223.0100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
210.9100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
197.0100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
164.399.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
160.499.9E-MEXP-509-raw-cel-829148276
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At4g03110828090RNA-binding protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBAC.G.S.X.
0.021e-138At3g22590821831RNA pol II accessory factor Cdc73 family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPC.G.S.X.
0.024e-136At5g44820834512unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.014e-136At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.024e-136At3g12000820374S-locus related protein SLR1, putative (S1)F:sugar binding;P:recognition of pollen;C:endomembrane system;POC.G.S.X.
0.022e+034At5g09900830850EMB2107 (EMBRYO DEFECTIVE 2107)Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxGma.13528.1.A1_atCD399839--3e+0At1g66420transcription regulatorC.G.S.X.
0.033e+032Hordeum vulgareHV_CEb0012K09r2_atHV_CEb0012K09r2--3e+0At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.031e+132Oryza sativaOsAffx.7280.1.S1_at---0C.G.S.X.
0.032e-344Populus trichocarpaPtpAffx.220187.1.S1_atpmrna36543hypothetical protein-1e-3At2g01780S-locus glycoprotein, putativeC.G.S.X.
0.041e-138Triticum aestivumTa.14011.2.A1_atBG906576--5e-2At2g01780S-locus glycoprotein, putativeC.G.S.X.
0.035e-134Vitis vinifera1616012_atCF413967hypothetical protein LOC100263474-8e-1At5g03400unknown proteinC.G.S.X.
0.021e+130Zea maysZmAffx.1104.1.A1_atAW191449hypothetical protein LOC100280210-2e-1At2g01960TET14 (TETRASPANIN14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0048544The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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