Gene omics information

Query gene ID At2g01620
Gene name MEE11 (maternal effect embryo arrest 11)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8693.1At2g01620814691MEE11 (maternal effect embryo arrest 11)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;MPOS.X.H.G.
0.6579.6At4g37200829874HCF164Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen.S.X.H.G.
0.6176.7At3g26085822206CAAX amino terminal protease family proteinF:molecular_function unknown;P:proteolysis;C:membrane;BOPAS.X.H.G.
0.6176.7At1g54520841894unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPOMS.X.H.G.
0.6176.7At5g48590834916unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.6176.7At5g19540832074unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBS.X.H.G.
0.6075.7At1g69390843271ATMINE1 (Arabidopsis homologue of bacterial MinE 1)Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.S.X.H.G.
0.6075.7At1g48450841266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.5773.8At1g67280843048lactoylglutathione lyase, putative / glyoxalase I, putativeF:lactoylglutathione lyase activity, metal ion binding;P:response to cold, carbohydrate metabolic process;C:thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma;BOMFPAS.X.H.G.
0.5773.8At1g49970841420CLPR1Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.3GSM133787Brueggemann_A-5-Brueg-Mck_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
10.799.2GSM134391St.Clair_1-52_279b_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
8.699.0GSM260957A5-LLOYD-CON_REP2GSE10326Transcriptome analysis of pho3
7.998.9GSM133786Brueggemann_A-4-Brueg-PpH_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
7.798.9GSM134379St.Clair_1-40_285_Est_0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
6.898.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
6.598.6GSM133746Shirras_1-8_Non-Calcicole_Rep4_ATH1GSE5728Environmental Genomics of calcicole-calcifuge physiology
6.398.6GSM7718820h pgm (Col-0) mutant replicate AGSE3424Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-136At5g38350833817disease resistance protein (NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFAC.G.S.X.
0.024e-136At4g02990828116mitochondrial transcription termination factor family protein / mTERF family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBC.G.S.X.
0.024e-136At4g22060828295F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.014e-136At3g44400823565disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PMBOFAVC.G.S.X.
0.014e-136At3g07540819943formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MOPFBVC.G.S.X.
0.022e+034At5g19200832040short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAC.G.S.X.
0.012e+034At5g66910836825disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxGma.8738.1.A1_atBU764151--1e+0At3g55672-C.G.S.X.
0.033e+032Hordeum vulgareContig23802_atContig23802--3e-20At2g22310ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4)C.G.S.X.
0.033e+034Oryza sativaOs01g0629000CA763820-Conserved hypothetical protein8e-1At5g04820OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)C.G.S.X.
0.022e+034Populus trichocarpaPtpAffx.187.1.A1_atDN488801--1e+0At2g46910plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.035e-136Triticum aestivumTaAffx.58374.1.S1_atCA620125--3e-1At2g01620MEE11 (maternal effect embryo arrest 11)C.G.S.X.
0.022e+032Vitis vinifera1613700_atCD717961hypothetical protein LOC100243012-3e-29At5g23290PDF5 (PREFOLDIN 5)C.G.S.X.
0.023e+032Zea maysZm.9404.1.A1_atBM348989immature colon carcinoma transcript 1 protein-2e-9At1g62850-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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