CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g01580

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.43 55.3 At2g01580 814687 unknown protein F:unknown;P:unknown;C:unknown;P S.X. H.G.
0.75 86.9 At1g53270 841761 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV S.X. H.G.
0.67 81.6 At3g04370 819592 PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. S.X. H.G.
0.67 81.6 At5g23190 832383 CYP86B1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product S.X. H.G.
0.33 38.1 At4g36610 829813 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
179.7 100.0 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
164.5 100.0 GSM131698 ATGE_81_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
157.2 99.9 GSM131697 ATGE_81_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
154.3 99.9 E-ATMX-1-raw-cel-1112746154
123.7 99.9 GSM131695 ATGE_79_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
115.2 99.9 GSM131694 ATGE_79_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
114.9 99.9 GSM131696 ATGE_79_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
65.7 99.8 E-ATMX-1-raw-cel-1112746095
60.4 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
57.6 99.8 GSM133763 Lindsey_1-15_torpedo-cotyledon_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.05 3e-1 36 At3g07510 819939 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB C.G. S.X.
0.03 3e-1 36 At3g50610 824224 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB C.G. S.X.
0.02 1e+0 34 At5g44050 834428 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA C.G. S.X.
0.02 1e+0 34 At5g50150 835080 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFB C.G. S.X.
0.02 1e+0 34 At5g48730 834931 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:chloroplast;POMFBA C.G. S.X.
0.01 1e+0 34 At4g31540 829281 ATEXO70G1 (exocyst subunit EXO70 family protein G1) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. C.G. S.X.
0.01 1e+0 34 At2g32660 817826 AtRLP22 (Receptor Like Protein 22) F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV C.G. S.X.
0.02 1e+0 34 At1g12330 837787 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;PFOM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Glycine max HgAffx.13452.1.S1_at CB374530 - - 9e-1 At1g29070 ribosomal protein L34 family protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig12501_at Contig12501 - - 2e-2 At5g50810 TIM8 C.G. S.X.
0.03 2e+0 34 Oryza sativa OsAffx.7596.1.S1_at - - - 0 C.G. S.X.
0.04 3e-2 40 Populus trichocarpa PtpAffx.43636.1.A1_at CV263638 hypothetical protein - 2e-2 At2g01580 unknown protein C.G. S.X.
0.03 5e+0 32 Triticum aestivum TaAffx.81087.1.S1_at CA689656 - - 4e+0 At3g29639 - C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1622069_at CD801772 - - 2e+0 At1g74340 dolichol phosphate-mannose biosynthesis regulatory protein-related C.G. S.X.
0.03 2e+0 32 Zea mays Zm.5515.1.A1_at CF631927 - - 3e+0 At2g01580 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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