Gene omics information

Query gene ID At2g01330
Gene name transducin family protein / WD-40 repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At2g01330814661transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPAS.X.H.G.
0.8994.6At3g51470824310protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVAS.X.H.G.
0.8089.8At1g22730838879MA3 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.6781.6At3g61760825349ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)F:GTP binding, GTPase activity;P:unknown;C:unknown;MFPOBAS.X.H.G.
0.5773.8At4g23490828447fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.5065.3At1g04760839424ATVAMP726member of Synaptobrevin -like protein familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
214.1100.0GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
199.5100.0GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
127.299.9GSM131591ATGE_36_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
113.799.9GSM131593ATGE_36_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
109.499.9GSM131592ATGE_36_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
85.199.9E-MEXP-1138-raw-cel-1432773258
66.299.8E-MEXP-1138-raw-cel-1432773290
63.999.8GSM106973ws_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
53.399.8GSM106924opr3_OPDA_2 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
51.099.8GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.183e-654At3g18060821331transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPAC.G.S.X.
0.017e-136At5g39410833937binding / catalyticF:binding, catalytic activity;P:metabolic process;C:mitochondrion, plasma membrane, vacuole, membrane, chloroplast envelope;OBMFPAC.G.S.X.
0.013e+034At3g43670823469copper amine oxidase, putativeF:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAC.G.S.X.
0.023e+034At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.C.G.S.X.
0.013e+034At2g19660816485DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOC.G.S.X.
0.013e+034At2g34710818036PHB (PHABULOSA)Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.C.G.S.X.
0.023e+034At2g16595816160-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOC.G.S.X.
0.013e+034At1g66960843014lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putativeF:lupeol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:unknown;BPOFMC.G.S.X.
0.013e+034At1g80710844410transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-138Glycine maxGmaAffx.38748.1.S1_atBE821199--2e-9At3g18060transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.086e-961Hordeum vulgareContig7947_atContig7947--2e-8At2g01330transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.124e-1377Oryza sativaOs01g0125800AK121927.1-Cytochrome cd1-nitrite reductase-like, C-terminalhaem d1 domain containing protein8e-8At3g18060transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.174e-963Populus trichocarpaPtpAffx.212698.1.S1_atpmrna24836hypothetical protein-6e-67At3g18060transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.051e-861Triticum aestivumTa.5519.1.S1_x_atCK199483--2e-8At2g01330transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.013e+032Vitis vinifera1619877_atCA812572hypothetical protein LOC100257064-6e-6At2g40095unknown proteinC.G.S.X.
0.041e-654Zea maysZm.17103.1.A1_atAW331809--1e-6At2g01330transducin family protein / WD-40 repeat family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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