Gene omics information

Query gene ID At2g01180
Gene name ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At2g01180814646ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.S.X.H.G.
0.7586.9At2g33580817923protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:plasma membrane;MPOBFVAS.X.H.G.
0.7083.5At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.S.X.H.G.
0.7083.5At5g47910834842RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.S.X.H.G.
0.6781.6At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.6680.1At1g27770839670ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.S.X.H.G.
0.6680.1At3g16720820924ATL2RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.S.X.H.G.
0.6579.6At5g66210836753CPK28member of Calcium Dependent Protein KinaseS.X.H.G.
0.6478.9At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroS.X.H.G.
0.6378.1At2g26190817159calmodulin-binding family proteinF:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
83.799.9GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
76.099.9E-MEXP-807-raw-cel-1173273170
75.199.9GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.999.8E-MEXP-1443-raw-cel-1581869863
57.599.8GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
53.799.8E-NASC-76-raw-cel-1359879132
49.799.8GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
49.799.8E-MEXP-807-raw-cel-1173273252
46.999.8E-MEXP-807-raw-cel-1173273196
39.999.8GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.095e-446At1g15080838072LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.C.G.S.X.
0.025e-136At3g02600821299LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)Encodes phosphatidic acid phosphatase. Expressed during germination.C.G.S.X.
0.025e-136At1g16690838238transcription factor-relatedF:transcription factor activity;P:regulation of transcription;C:unknown;MFPOC.G.S.X.
0.012e+034At5g05130830395SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinF:in 7 functions;P:unknown;C:unknown;MOBFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-552Glycine maxGmaAffx.30344.1.S1_atAW349341--5e-6At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.092e-1169Hordeum vulgareContig8594_atContig8594--2e-17At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.107e-859Oryza sativaOs01g0666000AK070670.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)5e-8At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.097e-756Populus trichocarpaPtpAffx.202610.1.S1_atpmrna5222hypothetical protein-2e-25At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.081e-1067Triticum aestivumTa.30410.1.A1_atCK209142--1e-10At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)C.G.S.X.
0.042e-446Vitis vinifera1621834_atBQ794561hypothetical protein LOC100254175-2e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.082e-756Zea maysZm.16854.1.S1_atCF674957hypothetical protein LOC100273231-1e-1At3g18220phosphatidic acid phosphatase family protein / PAP2 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
NGO:0006644The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00044Link to KaPPA-View 4Glycolipid biosynthesis(prokaryotic pathway)
00048Link to KaPPA-View 4Glycerolipid biosynthesis (prokaryotic pathway)
00423Link to KaPPA-View 4Glycerolipid biosynthesis (eukaryotic pathway)



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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