Gene omics information

Query gene ID At1g79900
Gene name BAC2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1912.7At1g79900844329BAC2encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosolS.X.H.G.
0.5570.6At4g24000828500ATCSLG2encodes a protein similar to cellulose synthaseS.X.H.G.
0.4050.8At3g57680824937peptidase S41 family proteinF:serine-type peptidase activity, protein binding;P:proteolysis, intracellular signaling cascade;C:chloroplast thylakoid lumen, membrane;OBPMS.X.H.G.
0.2930.3At2g25625817103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.2522.6At1g54570841899esterase/lipase/thioesterase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
135.499.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
131.299.9GSM133733Buchanan-Wollaston_A-5-bwoll-NG1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
117.999.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
79.799.9GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
62.799.8GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
62.099.8GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
60.999.8GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
59.799.8GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
53.599.8E-MEXP-475-raw-cel-680982521
53.399.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-240At3g221425008021structural constituent of cell wallEncodes a Protease inhibitor/seed storage/LTP family proteinC.G.S.X.
0.023e-240At3g13400820540sks13 (SKU5 Similar 13)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
0.011e-138At1g18190838398GC2 (golgin candidate 2)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508668 aa) portion of the protein.C.G.S.X.
0.024e-136At2g24540816990AFR (ATTENUATED FAR-RED RESPONSE)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVAC.G.S.X.
0.024e-136At2g4001081858960S acidic ribosomal protein P0 (RPP0A)F:structural constituent of ribosome;P:translational elongation, translation, ribosome biogenesis;C:cytosolic ribosome, ribosome;MOAFPBC.G.S.X.
0.012e+034At5g54080835494HGO (HOMOGENTISATE 1,2-DIOXYGENASE)homogentisate 1,2-dioxygenaseC.G.S.X.
0.022e+034At5g60490836170FLA12F:unknown;P:unknown;C:plasma membrane, anchored to membrane;PBOMAFC.G.S.X.
0.012e+034At4g13820827016disease resistance family protein / LRR family proteinF:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-654Glycine maxGmaAffx.72743.1.S1_atAI496298--1e-6At1g79900BAC2C.G.S.X.
0.038e-134Hordeum vulgareContig3426_atContig3426--9e-5At4g14690ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)C.G.S.X.
0.044e-344Oryza sativaOs01g02250009629.m01215-Mitochondrial substrate carrier family protein2e-3At1g79900BAC2C.G.S.X.
0.171e-552Populus trichocarpaPtpAffx.200612.1.S1_atpmrna1199hypothetical protein-9e-6At1g79900BAC2C.G.S.X.
0.032e+034Triticum aestivumTaAffx.4424.1.S1_atCA742364--1e+0At1g79900BAC2C.G.S.X.
0.061e-136Vitis vinifera1614704_atCF609069hypothetical protein LOC100265259-2e-1At1g79900BAC2C.G.S.X.
0.051e-240Zea maysZm.19039.1.S1_atBF728709mitochondrial carnitine/acylcarnitine carrier-like protein-2e-2At1g79900BAC2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
CGO:0006839Transport of substances into, out of or within a mitochondrion.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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