Gene omics information

Query gene ID At1g78990
Gene name transferase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g78990844239transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBS.X.H.G.
0.9496.7At2g35380818105peroxidase 20 (PER20) (P20)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBS.X.H.G.
0.9396.4At2g23540816886GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.9396.4At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.9396.4At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8994.6At5g58860836003CYP86A1 (CYTOCHROME P450 86 A1)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.S.X.H.G.
0.8491.9At5g37690833748GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.7385.5At1g74460843787GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.7184.2At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
149.199.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
127.899.9GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
106.999.9E-MEXP-828-raw-cel-1156922438
85.899.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
85.299.9GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
77.199.9E-MEXP-791-raw-cel-1122937614
68.599.9GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
62.599.8E-MEXP-722-raw-cel-1062243183
61.299.8GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
59.199.8GSM133122S0_12H_BGSE5688AtGenExpress: Response to sulfate limitation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.791e-110400At1g32910840185transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBC.G.S.X.
0.672e-53210At5g16410831502transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.017e-136At5g07820830675-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.013e+034At5g60960836217pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.003e+034At5g15680831422bindingF:binding;P:biological_process unknown;C:plasma membrane, membrane;MFPOC.G.S.X.
0.013e+034At4g33090829446APM1 (AMINOPEPTIDASE M1)encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).C.G.S.X.
0.023e+034At4g30620829185unknown proteinF:unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPC.G.S.X.
0.013e+034At3g60730825244pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.023e+034At3g56980824865BHLH039F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGmaAffx.9148.1.S1_atBI321527--7e-1At2g25185-C.G.S.X.
0.028e-238Hordeum vulgareContig13052_atContig13052--3e-1At5g63150unknown proteinC.G.S.X.
0.029e-240Oryza sativaOsAffx.28610.1.S1_at---0C.G.S.X.
0.046e-240Populus trichocarpaPtpAffx.207452.1.S1_atpmrna14793hypothetical protein-3e-2At1g78990transferase family proteinC.G.S.X.
0.024e-240Triticum aestivumTaAffx.81987.1.S1_atCA679335--1e+0At5g14410unknown proteinC.G.S.X.
0.028e-134Vitis vinifera1614329_s_atBQ800278hypothetical protein LOC100264072-2e+0At5g25640-C.G.S.X.
0.021e+034Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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