Gene omics information

Query gene ID At1g78950
Gene name beta-amyrin synthase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At1g78950844234beta-amyrin synthase, putativeF:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMAS.X.H.G.
1.00100.0At1g72110843542unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFS.X.H.G.
0.7586.9At5g25390832611SHN2 (shine2)encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.S.X.H.G.
0.6075.7At1g57750842150CYP96A15 (CYTOCHROME P450 96 A1)Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.S.X.H.G.
0.4457.2At4g33790829521CER4 (ECERIFERUM 4)Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
302.1100.0GSM131600ATGE_40_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
294.4100.0GSM131601ATGE_40_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
285.7100.0GSM131602ATGE_40_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
254.9100.0GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
208.0100.0GSM131687ATGE_76_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.8100.0GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
187.3100.0GSM131686ATGE_76_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
152.899.9GSM131685ATGE_76_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
111.199.9GSM62697Columbia_stemGSE2848Auxin Response Factor mediated flower gene expression
110.099.9E-MEXP-1451-raw-cel-1585200170
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.692e-178626At1g78955844235CAMS1 (Camelliol C synthase 1)F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMC.G.S.X.
0.482e-110400At1g78970844237LUP1 (LUPEOL SYNTHASE 1)Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.C.G.S.X.
0.436e-61236At1g66960843014lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putativeF:lupeol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:unknown;BPOFMC.G.S.X.
0.542e-51204At1g78960844236ATLUP2Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.C.G.S.X.
0.085e-963At5g42600834267MRN1 (MARNERAL SYNTHASE)Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.C.G.S.X.
0.112e-861At1g78480844184prenyltransferase/squalene oxidase repeat-containing proteinF:catalytic activity;P:unknown;C:endomembrane system;PFMOBC.G.S.X.
0.041e-656At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.254e-26121Glycine maxGma.16877.1.S1_atAY095999.1beta-amyrin synthase-7e-30At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.041e-138Hordeum vulgareContig11705_atContig11705--3e-29At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.074e-861Oryza sativaOs02g0139700AK121211.1-Cycloartenol synthase (EC 5.4.99.8)2e-24At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.162e-27125Populus trichocarpaPtpAffx.224959.1.S1_s_atpmrna43901hypothetical protein-2e-24At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.033e-138Triticum aestivumTa.9982.1.S1_atCA599875--9e-32At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.171e-344Vitis vinifera1614893_atCF568825--1e-3At1g78950beta-amyrin synthase, putativeC.G.S.X.
0.063e-550Zea maysZm.5697.2.S1_atAI834433--5e-25At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00419Link to KaPPA-View 4Triterpenoid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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