Gene omics information

Query gene ID At1g78950
Gene name beta-amyrin synthase, putative
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At1g78950844234beta-amyrin synthase, putativeF:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMAS.X.H.G.
1.00100.0At1g72110843542unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFS.X.H.G.
0.7586.9At5g25390832611SHN2 (shine2)encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.S.X.H.G.
0.6075.7At1g57750842150CYP96A15 (CYTOCHROME P450 96 A1)Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.S.X.H.G.
0.4457.2At4g33790829521CER4 (ECERIFERUM 4)Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.S.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
302.1100.0GSM131600ATGE_40_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
294.4100.0GSM131601ATGE_40_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
285.7100.0GSM131602ATGE_40_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
254.9100.0GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
208.0100.0GSM131687ATGE_76_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.8100.0GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
187.3100.0GSM131686ATGE_76_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
152.899.9GSM131685ATGE_76_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
111.199.9GSM62697Columbia_stemGSE2848Auxin Response Factor mediated flower gene expression
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.692e-178626At1g78955844235CAMS1 (Camelliol C synthase 1)F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMC.G.S.X.
0.482e-110400At1g78970844237LUP1 (LUPEOL SYNTHASE 1)Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.C.G.S.X.
0.436e-61236At1g66960843014lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putativeF:lupeol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:unknown;BPOFMC.G.S.X.
0.542e-51204At1g78960844236ATLUP2Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.C.G.S.X.
0.085e-963At5g42600834267MRN1 (MARNERAL SYNTHASE)Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.C.G.S.X.
0.112e-861At1g78480844184prenyltransferase/squalene oxidase repeat-containing proteinF:catalytic activity;P:unknown;C:endomembrane system;PFMOBC.G.S.X.
0.041e-656At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.C.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.254e-26121Glycine maxGma.16877.1.S1_atAY095999.1beta-amyrin synthase-7e-30At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.041e-138Hordeum vulgareContig11705_atContig11705--3e-29At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.074e-861Oryza sativaOs02g0139700AK121211.1-Cycloartenol synthase (EC (cycloartenol synthase 1)C.G.S.X.
0.162e-27125Populus trichocarpaPtpAffx.224959.1.S1_s_atpmrna43901hypothetical protein-2e-24At1g78955CAMS1 (Camelliol C synthase 1)C.G.S.X.
0.033e-138Triticum aestivumTa.9982.1.S1_atCA599875--9e-32At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
0.171e-344Vitis vinifera1614893_atCF568825--1e-3At1g78950beta-amyrin synthase, putativeC.G.S.X.
0.063e-550Zea maysZm.5697.2.S1_atAI834433--5e-25At2g07050CAS1 (cycloartenol synthase 1)C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00419Link to KaPPA-View 4Triterpenoid biosynthesis

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage