Gene omics information

Query gene ID At1g78340
Gene name ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3032.1At1g78340844169ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.6781.6At2g30340817584LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13)F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFVBAS.X.H.G.
0.6781.6At5g57090835813EIR1 (ETHYLENE INSENSITIVE ROOT 1)Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.S.X.H.G.
0.6378.1At1g73160843647glycosyl transferase family 1 proteinF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPMS.X.H.G.
0.6277.3At5g10720830938AHK5 (ARABIDOPSIS HISTIDINE KINASE 5)member of Histidine KinaseS.X.H.G.
0.5974.7At2g25980817139jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOS.X.H.G.
0.5773.8At1g31950840085terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;POS.X.H.G.
0.5065.3At4g37400829894CYP81F3member of CYP81FS.X.H.G.
0.4457.2At2g43610818963glycoside hydrolase family 19 proteinF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:plasma membrane;PBFOVMS.X.H.G.
0.4253.9At1g11000837643MLO4 (MILDEW RESISTANCE LOCUS O 4)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
78.699.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
75.999.9GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
74.899.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
72.399.9GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
72.199.9GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
62.699.8GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
61.099.8GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
59.599.8GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.999.8GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.499.8GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.512e-45182At1g78380844174ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.C.G.S.X.
0.332e-24113At1g78320844167ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.397e-24111At1g78370844173ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.422e-21103At1g78360844172ATGSTU21 (GLUTATHIONE S-TRANSFERASE TAU 21)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.133e-2099At1g17170838288ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.234e-1995At1g17190838290ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.231e-1687At1g17180838289ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.076e-1271At2g29460817495ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.092e-1169At3g43800823491ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-26121Glycine maxGma.339.1.S1_s_atAF048978.12,4-D inducible glutathione S-transferase-2e-28At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)C.G.S.X.
0.084e-238Hordeum vulgareContig7448_atContig7448--1e-1At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)C.G.S.X.
0.052e-138Oryza sativaOs10g0528300AF309378.1-Tau class GST protein 42e-4At3g43800ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)C.G.S.X.
0.131e-448Populus trichocarpaPtp.7441.1.S1_atCV255885hypothetical protein-1e-4At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)C.G.S.X.
0.099e-238Triticum aestivumTaAffx.42385.1.S1_atAF004358.1--1e-1At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)C.G.S.X.
0.113e-548Vitis vinifera1613204_atAF501625.1glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917-4e-8At1g17180ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)C.G.S.X.
0.046e-134Zea maysZm.558.1.S1_s_atAF244698.1glutathione S-transferase GSTU6 /// glutathione S-transferase GST 33 /// glutathione S-transferase GST 39-3e-2At1g59700ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0009407The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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