Gene omics information

Query gene ID At1g77950
Gene name AGL67 (AGAMOUS-LIKE 67)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8290.9At1g77950844130AGL67 (AGAMOUS-LIKE 67)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOS.X.H.G.
0.8994.6At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8793.5At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.8793.5At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.8592.4At3g58450825014universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFMS.X.H.G.
0.8491.9At5g22470832308NAD+ ADP-ribosyltransferaseF:NAD+ ADP-ribosyltransferase activity;P:protein amino acid ADP-ribosylation;C:intracellular, nucleus;MOPFBVS.X.H.G.
0.8491.9At4g09610826546GASA2 (GAST1 PROTEIN HOMOLOG 2)F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;PS.X.H.G.
0.8391.4At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.8391.4At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.8290.9At4g09600826545GASA3 (GAST1 PROTEIN HOMOLOG 3)One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1614.8100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
550.7100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
474.7100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
381.7100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
271.1100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
181.8100.0GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seeds
141.699.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
133.099.9GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
132.999.9GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
109.899.9GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.331e-28127At1g77980844133AGL66 (AGAMOUS-LIKE 66)Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.C.G.S.X.
0.232e-1583At1g22130838818AGL104 (AGAMOUS-LIKE 104)Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth.C.G.S.X.
0.032e-344At3g04100819565AGL57F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
0.024e-136At3g12540820433unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOAC.G.S.X.
0.034e-136At2g26320817172AGL33 (AGAMOUS-LIKE 33)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
0.012e+034At5g06120830499Ran-binding protein, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOPC.G.S.X.
0.012e+034At4g38130829969HD1 (HISTONE DEACETYLASE 1)Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-240Glycine maxGmaAffx.2810.1.S1_atBE659422--5e+0At5g18320armadillo/beta-catenin repeat family protein / U-box domain-containing proteinC.G.S.X.
0.032e-136Hordeum vulgareHF08F07r_atHF08F07r--2e-1At2g47780rubber elongation factor (REF) protein-relatedC.G.S.X.
0.072e-138Oryza sativaOs06g0223300AK111776.1-TDR8 protein2e-1At1g77950AGL67 (AGAMOUS-LIKE 67)C.G.S.X.
0.085e-446Populus trichocarpaPtpAffx.224235.1.S1_x_atpmrna42607hypothetical protein-1e-10At1g77980AGL66 (AGAMOUS-LIKE 66)C.G.S.X.
0.036e+032Triticum aestivumTaAffx.8733.1.S1_atCA620968--2e-2At1g12610DDF1 (DWARF AND DELAYED FLOWERING 1)C.G.S.X.
0.032e+032Vitis vinifera1622580_atCF403741--2e-1At3g32090transcription factor-relatedC.G.S.X.
0.034e-238Zea maysZm.19007.1.A1_atCO528314MADS-box protein AGL66-1e-2At1g77980AGL66 (AGAMOUS-LIKE 66)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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