Gene omics information

Query gene ID At1g77790
Gene name glycosyl hydrolase family 17 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g77790844116glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POFS.X.H.G.
0.5873.8At1g2229083883614-3-3 protein GF14, putative (GRF10)F:protein phosphorylated amino acid binding;P:unknown;C:unknown;MPOFS.X.H.G.
0.5873.8At5g04400830319anac077 (Arabidopsis NAC domain containing protein 77)F:DNA binding;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POBMS.X.H.G.
0.5773.8At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5570.6At3g45460823686zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.5368.6At3g13140820502hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:cellular_component unknown;PFMBOS.X.H.G.
0.5267.4At1g22720838878wall-associated kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFVBS.X.H.G.
0.5267.4At3g18540821385unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFVPAS.X.H.G.
0.5166.3At3g18900821423-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMS.X.H.G.
0.5065.3At1g60930842384ATRECQ4B (ARABIDOPSIS RECQ HELICASE L4B)AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
404.0100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
359.0100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
272.1100.0GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
132.099.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
128.899.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
127.299.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
116.499.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
115.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
115.199.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
109.799.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.048e-342At1g53625841798unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVAC.G.S.X.
0.043e-240At3g44950823630glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAC.G.S.X.
0.021e-138At5g20340832156BG5 (beta-1,3-glucanase 5)Encodes a putative beta 1,3-glucanase.C.G.S.X.
0.041e-138At5g20330832155BETAG4F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POC.G.S.X.
0.025e-136At4g26070828713MEK1 (MAP KINASE/ ERK KINASE 1)Member of MAP Kinase Kinase. Likely functions in a stress-activated MAPK pathway. Can phosphorylate the MAPK AtMPK4, in response to stress. Gets phosphorylated by MEKK1 in response to wounding.C.G.S.X.
0.025e-136At1g76010843932nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.012e+034At5g11700831042glycine-rich proteinF:unknown;P:unknown;C:vacuole;BMOPFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Glycine maxGmaAffx.34785.12.S1_atBQ080091--7e-2At5g19875unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareContig7669_s_atContig7669--1e+0At5g63905unknown proteinC.G.S.X.
0.033e-138Oryza sativaOsAffx.22876.1.S1_at---0C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.209513.1.S1_atpmrna18847hypothetical protein-4e+0At1g51930zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+034Triticum aestivumTa.19518.1.S1_atCA652910--2e+1At5g35375unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1610303_atBQ794090--6e-1At1g43320unknown proteinC.G.S.X.
0.029e-134Zea maysZmAffx.953.1.S1_atAI833455--1e+1At5g32440-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase
00436Link to KaPPA-View 4Callose/glucan degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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