Gene omics information

Query gene ID At1g77640
Gene name AP2 domain-containing transcription factor, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g77640844099AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
1.00100.0At1g21910838793AP2 domain-containing transcription factor family proteinencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
1.00100.0At1g35140840399PHI-1 (PHOSPHATE-INDUCED 1)At1g35140 (At1g35140/T32G9_32) mRNA, complete cdsS.X.H.G.
1.00100.0At4g08950826473EXO (EXORDIUM)F:molecular_function unknown;P:response to brassinosteroid stimulus;C:cell wall, plant-type cell wall;PBS.X.H.G.
0.8994.6At5g57560835860TCH4 (Touch 4)Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuliS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
168.5100.0E-MEXP-807-raw-cel-1173273170
145.599.9E-MEXP-807-raw-cel-1173273060
114.199.9E-MEXP-807-raw-cel-1173273116
106.499.9E-MEXP-98-raw-cel-320188859
105.699.9E-MEXP-807-raw-cel-1173273196
84.999.9E-MEXP-807-raw-cel-1173273088
79.699.9E-MEXP-807-raw-cel-1173273223
72.299.9E-MEXP-98-raw-cel-320189079
70.199.9E-MEXP-98-raw-cel-320188804
61.999.8E-TABM-224-raw-cel-720977689
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.331e-47190At1g21910838793AP2 domain-containing transcription factor family proteinencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.187e-1581At1g44830841047AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.051e-344At1g71520843492AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.042e-240At5g46010834641homeobox-leucine zipper transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:vacuole;PC.G.S.X.
0.029e-238At3g13960820609AtGRF5 (GROWTH-REGULATING FACTOR 5)Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.C.G.S.X.
0.024e-136At5g39865833983glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:plasma membrane;POMBFC.G.S.X.
0.034e-136At5g38790833870unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFC.G.S.X.
0.024e-136At5g23020832366IMS2 (2-ISOPROPYLMALATE SYNTHASE 2)methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis.C.G.S.X.
0.024e-136At5g22640832327emb1211 (embryo defective 1211)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;OMFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Glycine maxGma.7780.1.A1_atBU550204--3e-1At1g76650calcium-binding EF hand family proteinC.G.S.X.
0.033e+032Hordeum vulgareHW01C21u_atHW01C21u--3e+0At5g19480unknown proteinC.G.S.X.
0.037e-136Oryza sativaOsAffx.22943.1.S1_at---0C.G.S.X.
0.143e-1893Populus trichocarpaPtpAffx.8810.1.S1_atCK096534AP2/ERF domain-containing transcription factor /// AP2/ERF domain-containing transcription factor-2e-34At1g21910AP2 domain-containing transcription factor family proteinC.G.S.X.
0.044e-136Triticum aestivumTa.8426.2.S1_atBJ258563--1e+0At4g11385unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1617872_s_atCF404326hypothetical protein LOC100257528-1e-66At3g04600tRNA synthetase class I (W and Y) family proteinC.G.S.X.
0.036e-134Zea maysZm.13087.2.A1_a_atCF629954hypothetical protein LOC100276346-3e-4At5g47860unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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