Gene omics information

Query gene ID At1g77330
Gene name 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4761.2At1g773308440691-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativesimilar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)S.X.H.G.
0.6478.9At5g10720830938AHK5 (ARABIDOPSIS HISTIDINE KINASE 5)member of Histidine KinaseS.X.H.G.
0.5773.8At1g53180841752unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFS.X.H.G.
0.5570.6At3g01220821232ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity.S.X.H.G.
0.5368.6At2g27000817242CYP705A8member of CYP705AS.X.H.G.
0.5267.4At2g24610816997ATCNGC14member of Cyclic nucleotide gated channel familyS.X.H.G.
0.4862.5At2g24300816966calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:unknown;PBS.X.H.G.
0.4355.3At4g37400829894CYP81F3member of CYP81FS.X.H.G.
0.3846.7At5g57090835813EIR1 (ETHYLENE INSENSITIVE ROOT 1)Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.S.X.H.G.
0.3643.6At3g20130821556CYP705A22member of CYP705AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
134.199.9GSM226547Slice5JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
74.899.9GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
68.599.9GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
56.699.8GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
55.999.8GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
50.199.8GSM184892Arabidopsis, root cells, columella root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
49.699.8GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
42.899.8GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.599.8GSM266666Arabidopsis, root cells, columella root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
36.199.7GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.041e-757At4g25300828633oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.048e-652At5g63600836480FLS5 (FLAVONOL SYNTHASE 5)encodes a protein whose sequence is similar to flavonol synthaseC.G.S.X.
0.043e-550At1g17020838272SRG1 (SENESCENCE-RELATED GENE 1)Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.C.G.S.X.
0.041e-448At1g50960841518GA2OX7 (GIBBERELLIN 2-OXIDASE 7)Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins. DDF1 binds to GA2OX7 and regulates its expression in response to salt stress.C.G.S.X.
0.037e-342At4g16330827327oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:peroxisome;POBFMC.G.S.X.
0.047e-342At4g25310828634oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.037e-342At2g01150814644RHA2B (RING-H2 FINGER PROTEIN 2B)Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.C.G.S.X.
0.047e-342At1g78550844191oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:unknown;C:unknown;POBFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.221e-1481Glycine maxGma.3668.1.S1_a_atAW349263--1e-14At1g773301-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
0.046e-238Hordeum vulgareContig2642_atContig2642--2e-1At1g773301-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
0.039e-136Oryza sativaOsAffx.10271.1.S1_at---0C.G.S.X.
0.292e-1377Populus trichocarpaPtp.1479.1.S1_atAY167040.11-aminocyclopropane-1-carboxylate-2e-13At1g773301-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
0.032e+034Triticum aestivumTa.11292.1.A1_atCA646718--5e-3At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.061e-446Vitis vinifera1613961_atCF404551hypothetical protein LOC100253700-7e-5At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
0.055e-238Zea maysZm.8714.1.A1_atAY359573.1acc oxidase-7e-10At1g05010EFE (ETHYLENE-FORMING ENZYME)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00270Link to KEGG PATHWAYCysteine and methionine metabolism
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
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