CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g76360

Gene name protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.58 73.8 At1g76360 843968 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA S.X. H.G.
0.81 90.4 At4g34150 829563 C2 domain-containing protein F:unknown;P:response to cold;C:unknown;MPFOBVA S.X. H.G.
0.73 85.5 At3g52400 824405 SYP122 (SYNTAXIN OF PLANTS 122) syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway S.X. H.G.
0.71 84.2 At3g09830 820141 protein kinase, putative F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA S.X. H.G.
0.65 79.6 At4g39640 830118 GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. S.X. H.G.
0.62 77.3 At4g12720 826884 NUDT7 Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death. S.X. H.G.
0.58 73.8 At4g34390 829589 XLG2 (extra-large GTP-binding protein 2) F:guanyl nucleotide binding, signal transducer activity;P:in 7 processes;C:nucleus;MFPOB S.X. H.G.
0.56 73.0 At1g55450 841992 embryo-abundant protein-related F:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOA S.X. H.G.
0.55 70.6 At5g06320 830520 NHL3 encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane. S.X. H.G.
0.54 69.5 At2g05940 815147 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
288.4 100.0 GSM142902 WW001_ATH1_A1-WILLA-CON GSE6181 Assembly of the cell wall pectic matrix.
219.7 100.0 GSM142904 WW002_ATH1_A1-willa-CON-REP2 GSE6181 Assembly of the cell wall pectic matrix.
88.9 99.9 E-MEXP-807-raw-cel-1173273144
57.9 99.8 E-MEXP-807-raw-cel-1173273252
49.6 99.8 E-MEXP-807-raw-cel-1173273170
42.7 99.8 E-MEXP-807-raw-cel-1173273060
42.2 99.8 E-MEXP-807-raw-cel-1173273223
41.4 99.8 E-MEXP-807-raw-cel-1173273088
39.3 99.8 E-MEXP-807-raw-cel-1173273196
38.5 99.8 E-MEXP-807-raw-cel-1173273116
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.08 6e-17 89 At4g35600 829712 CONNEXIN 32 plant-type connexin (gap junction-type protein), a component of plasmodesmata C.G. S.X.
0.05 5e-5 50 At2g17220 816227 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA C.G. S.X.
0.02 8e-4 46 At2g05940 815147 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.05 3e-3 44 At2g25220 817060 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
0.04 1e-2 42 At5g11410 831012 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
0.02 5e-2 40 At2g02800 814810 APK2B (PROTEIN KINASE 2B) Encodes protein kinase APK2b. C.G. S.X.
0.08 5e-2 40 At1g07570 837271 APK1A Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-3 46 Glycine max GmaAffx.48370.1.S1_at AW306889 - - 3e-4 At2g17220 protein kinase, putative C.G. S.X.
0.03 6e-6 52 Hordeum vulgare Contig7535_at Contig7535 - - 3e-2 At4g35600 CONNEXIN 32 C.G. S.X.
0.08 2e-5 52 Oryza sativa Os02g0118200 AK111716.1 - Protein kinase 8e-4 At4g35600 CONNEXIN 32 C.G. S.X.
0.12 2e-5 52 Populus trichocarpa PtpAffx.201546.1.S1_at pmrna3041 hypothetical protein - 5e-7 At2g17220 protein kinase, putative C.G. S.X.
0.08 2e-7 57 Triticum aestivum Ta.7718.2.S1_x_at CA593071 - - 7e-8 At1g76360 protein kinase, putative C.G. S.X.
0.04 8e-1 34 Vitis vinifera 1616357_at CF516994 hypothetical protein LOC100255530 - 5e-16 At2g17220 protein kinase, putative C.G. S.X.
0.02 8e-2 38 Zea mays Zm.4140.1.S1_at BE552528 hypothetical protein LOC100191980 - 2e-17 At1g69790 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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