Gene omics information

Query gene ID At1g76310
Gene name CYCB2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At1g76310843964CYCB2core cell cycle genesS.X.H.G.
0.8994.6At3g02640821289unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.8994.6At5g36710833636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8391.4At3g25980822195mitotic spindle checkpoint protein, putative (MAD2)F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOPS.X.H.G.
0.6781.6At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
0.6781.6At1g76540843987CDKB2Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.799.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
33.199.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
28.199.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
26.399.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.299.7E-MEXP-1360-raw-cel-1561600622
22.799.6GSM133950Murray_2-6_T10-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
22.599.6GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
22.399.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.899.6E-MEXP-682-raw-cel-922397713
21.699.6GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.572e-161569At1g20610838650CYCB2F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVBC.G.S.X.
0.514e-113408At1g20590838648cyclin, putativeF:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:endomembrane system, nucleus;MPOFC.G.S.X.
0.041e-242At4g35620829714CYCB2F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVBC.G.S.X.
0.012e-138At3g17310820994methyltransferase family proteinF:methyltransferase activity, DNA binding;P:DNA methylation;C:cellular_component unknown;POC.G.S.X.
0.012e-138At2g17620816269CYCB2F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVC.G.S.X.
0.016e-136At5g55740835668CRR21 (chlororespiratory reduction 21)Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.C.G.S.X.
0.016e-136At5g13520831196peptidase M1 family proteinF:metallopeptidase activity, binding, zinc ion binding;P:proteolysis, leukotriene biosynthetic process;C:cellular_component unknown;BMOFAPC.G.S.X.
0.026e-136At4g07965826302unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknownC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.113e-1067Glycine maxGma.14616.1.S1_atCD412608--1e-10At1g76310CYCB2C.G.S.X.
0.021e+034Hordeum vulgareContig24446_atContig24446--2e+1At5g2244060S ribosomal protein L10A (RPL10aC)C.G.S.X.
0.071e-656Oryza sativaOs06g0726800AK070518.1-G2/mitotic-specific cyclin 2 (B-like cyclin)(CycOs2)4e-6At1g20590cyclin, putativeC.G.S.X.
0.201e-1275Populus trichocarpaPtpAffx.147539.1.A1_atCV234344--6e-13At1g76310CYCB2C.G.S.X.
0.027e-136Triticum aestivumTa.22585.2.S1_x_atBQ482750--3e+0At5g46820unknown proteinC.G.S.X.
0.022e-136Vitis vinifera1610308_atCF414056--4e+0At4g17905ATL4HC.G.S.X.
0.078e-857Zea maysZm.4846.1.A1_atBQ538226cyclin B2-3e-7At1g76310CYCB2C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0051726Any process that modulates the rate or extent of progression through the cell cycle.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage