Gene omics information

Query gene ID At1g75940
Gene name ATA27
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g75940843927ATA27encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.S.X.H.G.
0.9897.8At2g03740814901late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFAS.X.H.G.
0.9897.8At1g20120838601family II extracellular lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAVS.X.H.G.
0.9897.8At1g68875843220unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9697.3At2g03850814911late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFAS.X.H.G.
0.9697.3At1g75910843924EXL4member of Lipase proteinsS.X.H.G.
0.9095.1At3g25050822096XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.S.X.H.G.
0.8994.6At1g06260837137cysteine proteinase, putativeF:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFS.X.H.G.
0.8994.6At3g51590824322LTP12 (LIPID TRANSFER PROTEIN 12)Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.S.X.H.G.
0.8994.6At4g14815827138protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
144.199.9E-MEXP-1592-raw-cel-1617526880
137.999.9E-MEXP-1592-raw-cel-1617526944
123.899.9E-MEXP-1592-raw-cel-1617526976
120.699.9GSM232889Wt.3-1.0GSE9201Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
119.299.9E-MEXP-1592-raw-cel-1617526848
111.299.9GSM253201Nontransgenic(ga1-3rgargl2)-DEX-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible system
110.299.9GSM253199Nontransgenic(ga1-3rgargl2)-DEX-REP1GSE10019Identification of RGA downstream genes by using steroid-inducible system
108.099.9E-MEXP-1592-raw-cel-1617526912
90.199.9GSM232882Mut.3-2.90GSE9201Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
88.499.9GSM131580ATGE_32_B2GSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.429e-121434At3g21370821691BGLU19 (BETA GLUCOSIDASE 19)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAC.G.S.X.
0.444e-92339At1g52400841670BGLU18 (BETA GLUCOSIDASE 18)encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formationC.G.S.X.
0.222e-41171At3g09260820082PYK10Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.C.G.S.X.
0.214e-1893At1g66280842945BGLU22F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:membrane;BOPMFAC.G.S.X.
0.226e-1479At1g66270842944BGLU21F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFAC.G.S.X.
0.199e-1065At5g28510832944BGLU24 (BETA GLUCOSIDASE 24)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAC.G.S.X.
0.023e-963At2g44490819056PEN2 (PENETRATION 2)Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.C.G.S.X.
0.075e-859At3g60120825182BGLU27 (BETA GLUCOSIDASE 27)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-346Glycine maxGmaAffx.55223.1.S1_atBM086162--9e-4At5g42260BGLU12 (BETA GLUCOSIDASE 12)C.G.S.X.
0.026e-342Hordeum vulgareContig8927_atContig8927--2e-8At5g36890BGLU42 (BETA GLUCOSIDASE 42)C.G.S.X.
0.024e-138Oryza sativaOs01g0508000NM_193731.1-Beta-glucosidase5e-11At3g18070BGLU43 (BETA GLUCOSIDASE 43)C.G.S.X.
0.072e-242Populus trichocarpaPtpAffx.204078.1.S1_s_atpmrna8052hypothetical protein-4e-5At5g42260BGLU12 (BETA GLUCOSIDASE 12)C.G.S.X.
0.035e-240Triticum aestivumTaAffx.4445.1.S1_atCA741494--1e-3At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.034e-342Vitis vinifera1622281_atCD715637hypothetical LOC100250160-2e-11At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.025e+032Zea maysZmAffx.1117.1.A1_atAW257962--2e+0At3g15150zinc ion bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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