Gene omics information

Query gene ID At1g75040
Gene name PR5 (PATHOGENESIS-RELATED GENE 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.S.X.H.G.
0.7385.5At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.S.X.H.G.
0.6176.7At2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.S.X.H.G.
0.5368.6At3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanaseS.X.H.G.
0.4253.9At5g55450835638protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
53.999.8E-ATMX-25-raw-cel-1441077517
53.899.8E-ATMX-25-raw-cel-1441077500
51.999.8E-ATMX-25-raw-cel-1441077482
49.999.8E-MEXP-173-raw-cel-357965520
39.399.8GSM250948mil4 overexpression line with BTH treatment, biological rep1GSE9956Expression profiling of the overexpression of MILDEW-INDUCED LESIONS 4
37.399.7GSM250966mil4 with BTH treatment, biological rep3GSE9955MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense response
36.999.7GSM250949mil4 overexpression line with BTH treatment, biological rep2GSE9956Expression profiling of the overexpression of MILDEW-INDUCED LESIONS 4
36.099.7GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
35.499.7GSM157312Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
34.999.7GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.585e-62238At1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.552e-46186At1g75030843841ATLP-3encodes a PR5-like proteinC.G.S.X.
0.124e-756At4g36010829757pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVC.G.S.X.
0.046e-652At1g19320838514pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.139e-548At2g17860816296pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.114e-446At4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVC.G.S.X.
0.026e-342At5g38280833810PR5Kputative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-240Glycine maxGmaAffx.59879.1.S1_atBM520465--2e-9At1g75030ATLP-3C.G.S.X.
0.072e-136Hordeum vulgareContig2790_s_atContig2790thaumatin-like protein TLP7-3e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.087e-136Oryza sativaOsAffx.32171.2.S1_at---0C.G.S.X.
0.051e-138Populus trichocarpaPtpAffx.203672.1.S1_atpmrna7274hypothetical protein-9e-5At1g75800pathogenesis-related thaumatin family proteinC.G.S.X.
0.054e-136Triticum aestivumTa.2002.1.S1_atCD453897--4e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.127e-650Vitis vinifera1616617_atAF195654.1SCUTL2-3e-5At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.072e-136Zea maysZmAffx.1198.1.A1_atBE056195--2e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010224A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm.
XGO:0009627The salicylic acid mediated response to a pathogen which confers broad spectrum resistance.
XGO:0031540Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.
CGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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