CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g74490

Gene name protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g74490 843790 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.82 90.9 At2g29410 817490 MTPB1 (METAL TOLERANCE PROTEIN B1) member of Zinc transporter (ZAT) family S.X. H.G.
0.75 86.9 At5g48270 834880 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.68 82.2 At1g65240 842831 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PMFO S.X. H.G.
0.67 81.6 At4g15650 827242 protein kinase-related F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVA S.X. H.G.
0.66 80.1 At5g25530 832628 DNAJ heat shock protein, putative F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV S.X. H.G.
0.66 80.1 At5g64510 836572 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.66 80.1 At1g74000 843738 SS3 (STRICTOSIDINE SYNTHASE 3) encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis. S.X. H.G.
0.64 78.9 At2g03410 814870 Mo25 family protein F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO S.X. H.G.
0.63 78.1 At5g16540 831516 ZFN3 (ZINC FINGER NUCLEASE 3) Encodes a zinc finger protein. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
593.2 100.0 E-MEXP-285-raw-cel-440782725
425.0 100.0 E-MEXP-285-raw-cel-440782791
214.8 100.0 E-ATMX-35-raw-cel-1574334864
190.5 100.0 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
182.6 100.0 E-ATMX-35-raw-cel-1574334880
160.9 99.9 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
120.7 99.9 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
120.1 99.9 GSM154508 Arabidopsis growing pollen tubes rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
118.6 99.9 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
117.1 99.9 GSM184908 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.15 5e-17 89 At1g26970 839588 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:chloroplast;MPOBFVA C.G. S.X.
0.11 2e-10 67 At1g69790 843315 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA C.G. S.X.
0.08 7e-10 65 At2g28930 817442 APK1B F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVA C.G. S.X.
0.08 3e-9 63 At1g07570 837271 APK1A Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues C.G. S.X.
0.03 2e-6 54 At2g17220 816227 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-3 44 Glycine max Gma.8195.2.S1_a_at BG510290 - - 3e-21 At2g02800 APK2B (PROTEIN KINASE 2B) C.G. S.X.
0.05 3e-4 46 Hordeum vulgare Contig25812_at Contig25812 - - 6e-4 At1g74490 protein kinase, putative C.G. S.X.
0.04 1e-3 46 Oryza sativa Os10g0405100 AK100413.1 - Protein kinase APK1B (EC 2.7.1.-) 2e-9 At2g02800 APK2B (PROTEIN KINASE 2B) C.G. S.X.
0.09 2e-4 48 Populus trichocarpa PtpAffx.145419.1.S1_at DN499425 hypothetical protein - 5e-13 At5g02290 NAK C.G. S.X.
0.05 4e-2 40 Triticum aestivum Ta.14470.1.S1_a_at CA609850 - - 4e-14 At1g07570 APK1A C.G. S.X.
0.03 5e-5 48 Vitis vinifera 1607675_at CD011506 hypothetical protein LOC100253466 - 3e-11 At1g07570 APK1A C.G. S.X.
0.08 1e-6 54 Zea mays Zm.4140.1.S1_at BE552528 hypothetical protein LOC100191980 - 2e-17 At1g69790 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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