CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g74450

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g74450 843786 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.81 90.4 At3g46620 823815 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVB S.X. H.G.
0.63 78.1 At1g18740 838456 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PA S.X. H.G.
0.61 76.7 At5g59730 836094 ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. S.X. H.G.
0.55 70.6 At5g59550 836074 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVB S.X. H.G.
0.50 65.3 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF S.X. H.G.
0.48 62.5 At4g24570 828559 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.46 59.8 At3g28340 822462 GATL10 (Galacturonosyltransferase-like 10) Encodes a protein with putative galacturonosyltransferase activity. S.X. H.G.
0.44 57.2 At2g05050 3767735 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
0.42 53.9 At1g27730 839666 STZ (salt tolerance zinc finger) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
118.1 99.9 E-MEXP-807-raw-cel-1173273196
104.0 99.9 E-MEXP-807-raw-cel-1173273223
79.3 99.9 E-MEXP-807-raw-cel-1173273088
71.7 99.9 GSM184520 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
70.2 99.9 E-MEXP-807-raw-cel-1173273116
69.2 99.9 E-MEXP-807-raw-cel-1173273170
67.4 99.8 E-MEXP-807-raw-cel-1173273252
62.5 99.8 GSM142653 MC002_ATH1_A11.1-dubos-mxh GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
62.1 99.8 GSM142654 MC002_ATH1_A11.2-dubos-mxh GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
59.8 99.8 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.47 8e-25 115 At1g18740 838456 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PA C.G. S.X.
0.17 1e-8 61 At1g43630 840947 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB C.G. S.X.
0.01 4e-2 40 At5g37790 833757 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.01 4e-2 40 At5g07340 830625 calnexin, putative F:unfolded protein binding, calcium ion binding;P:protein folding;C:endoplasmic reticulum, plasma membrane, chloroplast, membrane;MOPFBV C.G. S.X.
0.01 4e-2 40 At3g52140 824378 tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:plasma membrane, chloroplast;MBFOPAV C.G. S.X.
0.01 4e-2 40 At1g33410 840234 SAR1 (suppressor of auxin resistance1) F:unknown;P:response to auxin stimulus, mRNA export from nucleus, developmental process;C:nuclear membrane;MPFO C.G. S.X.
0.01 1e-1 38 At5g03900 831927 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;BPO C.G. S.X.
0.02 1e-1 38 At4g11300 826732 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 9e-4 46 Glycine max GmaAffx.66392.1.S1_at BE822431 - - 4e-4 At1g74450 unknown protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig9165_at Contig9165 - - 2e-3 At4g31410 unknown protein C.G. S.X.
0.03 7e-2 40 Oryza sativa OsAffx.5142.1.S1_x_at - - - 0 C.G. S.X.
0.15 2e-10 67 Populus trichocarpa PtpAffx.3400.3.S1_at DN492271 hypothetical protein - 1e-10 At1g74450 unknown protein C.G. S.X.
0.02 6e-1 36 Triticum aestivum Ta.21523.1.S1_at CA695421 - - 4e+0 At4g02370 unknown protein C.G. S.X.
0.04 2e-1 36 Vitis vinifera 1613546_at CF213271 hypothetical protein LOC100252142 - 4e-1 At1g74450 unknown protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.15206.1.A1_at BM268642 - - 6e-18 At3g57230 AGL16 (AGAMOUS-LIKE 16) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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