Gene omics information

Query gene ID At1g74130
Gene name rhomboid family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At1g74130843753rhomboid family proteinF:unknown;P:unknown;C:integral to membrane;BOFPAMS.X.H.G.
0.5773.8At5g61110836232protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.3338.1At1g23810838992paired amphipathic helix repeat-containing proteinF:molecular_function unknown;P:regulation of transcription, DNA-dependent;C:nucleus;MPFOS.X.H.G.
0.135.8At5g60090836131protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.124.9At3g28470822477TDF1 (DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1)Member of the R2R3 factor gene family.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
258.3100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
255.8100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
236.6100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
236.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
227.6100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
217.1100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
212.9100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
199.5100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
199.4100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
194.1100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.725e-109395At1g74140843754-F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;BOFPMAC.G.S.X.
0.055e-1065At1g18600838441RBL12 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12)Mitochondrion-located rhomboid-like proteinC.G.S.X.
0.021e-138At4g37850829941basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Glycine maxGmaAffx.49418.1.A1_atBE806592--1e-7At1g18600RBL12 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12)C.G.S.X.
0.022e-136Hordeum vulgareContig21917_atContig21917--5e+0At5g27860unknown proteinC.G.S.X.
0.024e+034Oryza sativaOs02g01847009630.m00833-Cytochrome P450 family protein1e-2At5g25180CYP71B14C.G.S.X.
0.021e+132Populus trichocarpaPtpAffx.34171.1.S1_atCV241538--3e-1At1g19400unknown proteinC.G.S.X.
0.022e+034Triticum aestivumTa.9960.1.S1_a_atBJ235592--8e-1At3g51100unknown proteinC.G.S.X.
0.036e-134Vitis vinifera1611995_atBQ792914--5e-1At5g65040senescence-associated protein-relatedC.G.S.X.
0.021e+130Zea maysZmAffx.1061.1.A1_atAI881945Hypothetical protein LOC100193941-2e-1At4g22160unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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