CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g73340

Gene name electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.11 4.1 At1g73340 843669 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;MPFBOAV S.X. H.G.
0.46 59.8 At4g19460 827687 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF S.X. H.G.
0.30 32.1 At1g44318 841025 hemb2 F:porphobilinogen synthase activity, catalytic activity, metal ion binding;P:porphyrin biosynthetic process;C:unknown;OBMFAP S.X. H.G.
0.29 30.3 At5g57500 835854 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:endomembrane system, membrane;PMOF S.X. H.G.
0.22 17.5 At1g10530 837594 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
215.6 100.0 GSM184892 Arabidopsis, root cells, columella root cap, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
212.8 100.0 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
210.4 100.0 GSM266665 Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
204.9 100.0 GSM266668 Arabidopsis, root cells, columella root cap, -Fe, replicate 3 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
189.5 100.0 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
171.7 100.0 GSM266666 Arabidopsis, root cells, columella root cap, -Fe, replicate 1 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
168.9 100.0 GSM184894 Arabidopsis, root cells, columella root cap, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
157.6 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
144.7 99.9 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
139.0 99.9 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e-1 38 At1g51538 5007789 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB C.G. S.X.
0.01 7e-1 36 At5g52450 835321 MATE efflux protein-related F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:plasma membrane, membrane;BOPFAM C.G. S.X.
0.01 7e-1 36 At4g04960 825837 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.01 7e-1 36 At4g00820 828002 iqd17 (IQ-domain 17) F:calmodulin binding;P:biological_process unknown;C:unknown;POMFVB C.G. S.X.
0.01 7e-1 36 At4g17050 827413 UGLYAH (UREIDOGLYCINE AMINOHYDROLASE) F:transcription factor activity;P:regulation of transcription;C:endomembrane system;BOPFA C.G. S.X.
0.01 7e-1 36 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. C.G. S.X.
0.01 7e-1 36 At2g17150 816220 RWP-RK domain-containing protein F:transcription factor activity;P:unknown;C:unknown;POFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Glycine max GmaAffx.8081.1.S1_at BE657255 - - 6e-8 At3g25900 HMT-1 C.G. S.X.
0.02 4e-1 36 Hordeum vulgare HO13H03S_at HO13H03S - - 1e+0 At5g67160 EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1) C.G. S.X.
0.02 1e+0 36 Oryza sativa OsAffx.2320.1.S1_at - - - 0 C.G. S.X.
0.34 4e-31 137 Populus trichocarpa PtpAffx.217928.1.S1_at pmrna33394 cytochrome P450 - 3e-31 At1g73340 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.13004.1.S1_at BJ211609 - - 3e-13 At1g51570 C2 domain-containing protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1620697_at CF568836 - - 1e+0 At3g13857 unknown protein C.G. S.X.
0.02 3e-1 36 Zea mays Zm.3132.2.A1_at AY109250.1 - - 4e-7 At3g02510 regulator of chromosome condensation (RCC1) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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