Gene omics information

Query gene ID At1g73190
Gene name TIP3
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At1g73190843653TIP3Moves to the Protein Storage Vacuole in a Golgi independent mannerS.X.H.G.
0.8391.4At2g28490817397cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;BMPOFVAS.X.H.G.
0.8391.4At3g01570821106glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PS.X.H.G.
0.8089.8At5g40420834040OLEO2 (OLEOSIN 2)Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.S.X.H.G.
0.7586.9At4g25140828617OLEO1 (OLEOSIN 1)Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.S.X.H.G.
0.7385.5At5g50600835129AtHSD1 (hydroxysteroid dehydrogenase 1)F:oxidoreductase activity, binding, catalytic activity;P:response to brassinosteroid stimulus, response to abscisic acid stimulus;C:endomembrane system;BOMFPAVS.X.H.G.
0.7184.2At3g27660822388OLEO4 (OLEOSIN 4)Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
227.8100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
220.8100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
218.8100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
214.6100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
214.1100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
205.5100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
204.2100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
188.8100.0E-ATMX-1-raw-cel-1112746209
182.2100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
156.899.9E-ATMX-1-raw-cel-1112746267
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.651e-50200At1g17810838359BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)beta-tonoplast intrinsic protein (beta-TIP) mRNA, completeC.G.S.X.
0.044e-446At3g53420824510PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf devC.G.S.X.
0.042e-344At2g45960819204PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.C.G.S.X.
0.036e-342At3g16240820870DELTA-TIPDelta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane.C.G.S.X.
0.066e-342At2g36830818255GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)encodes a tonoplast intrinsic protein, which functions as water channel. highly expressed in root, stem, cauline leaves and flowers. Complete knock out mutants have no detectable phenotype from the wild type.C.G.S.X.
0.033e-240At3g26520822259TIP2 (TONOPLAST INTRINSIC PROTEIN 2)gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.C.G.S.X.
0.043e-240At1g01620839235PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-342Glycine maxGmaAffx.79829.1.S1_atAI941230--8e-17At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.045e-238Hordeum vulgareContig1225_s_atContig1225aquaporin-5e-31At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.055e-240Oryza sativaOs01g0232000AK069192.1-Aquaglyceroporin (Tonoplast intrinsic protein(Tipa))1e-1At3g16240DELTA-TIPC.G.S.X.
0.231e-757Populus trichocarpaPtpAffx.217238.1.S1_s_atpmrna32424aquaporin, MIP family, TIP subfamily-9e-12At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.053e-240Triticum aestivumTa.22892.1.S1_atCA618864--1e-9At3g61430PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)C.G.S.X.
0.041e-136Vitis vinifera1610982_atCF214253aquaporin PIP2-6e-18At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.033e-342Zea maysZm.600.1.S1_atAY243802.1plasma membrane intrinsic protein-9e-34At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006914The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation.
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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