Gene omics information

Query gene ID At1g73040
Gene name jacalin lectin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At1g73040843635jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOS.X.H.G.
0.4050.8At3g19550821491unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PS.X.H.G.
0.2726.2At3g62960825471glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBOS.X.H.G.
0.2624.4At1g31490840039transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, quinone binding, amine oxidase activity, copper ion binding, transferase activity;P:cellular amine metabolic process;C:chloroplast;PFS.X.H.G.
0.2522.6At5g04080830287unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFS.X.H.G.
0.092.8At5g16570831519GLN1Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammoniumS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
126.599.9GSM133293NO.30GSE5698AtGenExpress: Cytokinin treatment of seedlings
122.799.9GSM258003LMPC-derived phloem_2GSE10247Transcriptome analysis of the Arabidopsis phloem
121.999.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
111.799.9GSM258004LMPC-derived phloem_3GSE10247Transcriptome analysis of the Arabidopsis phloem
93.499.9GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
86.799.9GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
83.199.9GSM142626MC002_ATH1_A2.1-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
76.899.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
73.899.9GSM142627MC002_ATH1_A2.2-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
71.999.9E-MEXP-1451-raw-cel-1585200362
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-240At1g52030841632MBP2 (MYROSINASE-BINDING PROTEIN 2)Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers.C.G.S.X.
0.037e-238At1g51320841555F-box family protein (FBX11)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:chloroplast;POC.G.S.X.
0.013e-136At3g18230821351octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:unknown;P:unknown;C:cytosol, nucleus;MOFPBVAC.G.S.X.
0.021e+034At5g49215834981glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PBFOMAC.G.S.X.
0.011e+034At3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVC.G.S.X.
0.011e+034At1g70620843399cyclin-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.011e+034At1g12220837775RPS5 (RESISTANT TO P. SYRINGAE 5)Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-344Glycine maxGmaAffx.83609.1.S1_atBU926787--1e-12At2g44910ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4)C.G.S.X.
0.035e-134Hordeum vulgareContig12729_atContig12729--2e-7At5g65810unknown proteinC.G.S.X.
0.041e-448Oryza sativaOs01g0775500AK100936.1-Jacalin-related lectin domain containing protein2e-4At1g73040jacalin lectin family proteinC.G.S.X.
0.049e-238Populus trichocarpaPtpAffx.57521.1.S1_atDN494926hypothetical protein-7e-2At1g73040jacalin lectin family proteinC.G.S.X.
0.047e-238Triticum aestivumTaAffx.58044.1.S1_atCA622873--7e-8At5g10780-C.G.S.X.
0.031e+032Vitis vinifera1618415_s_atCF607730--8e-1At3g53060ASK6 (ARABIDOPSIS SKP1-LIKE 6)C.G.S.X.
0.032e+032Zea maysZm.13249.2.S1_atCF012746--1e+0At1g35255unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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