CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g73010

Gene name phosphatase

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.84 91.9 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF S.X. H.G.
0.84 91.9 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
0.84 91.9 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.80 89.8 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
0.80 89.8 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
0.78 88.6 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.77 88.0 At3g43110 823370 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.75 86.9 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. S.X. H.G.
0.74 86.1 At5g20150 832137 SPX1 (SPX DOMAIN GENE 1) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
132.8 99.9 E-MEXP-791-raw-cel-1122937569
121.7 99.9 GSM134206 Murray_3-3_D5-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
121.1 99.9 E-MEXP-791-raw-cel-1122937533
121.0 99.9 E-MEXP-791-raw-cel-1122937551
118.7 99.9 E-MEXP-807-raw-cel-1173273252
115.7 99.9 E-MEXP-807-raw-cel-1173273144
114.4 99.9 GSM270853 Arabidopsis cell culture, 4 h_control_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
111.0 99.9 GSM270865 Arabidopsis cell culture, 4 h_control_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
108.3 99.9 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
101.7 99.9 E-MEXP-791-raw-cel-1122937587
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.64 1e-103 377 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF C.G. S.X.
0.02 1e-4 48 At3g50840 824248 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PMFO C.G. S.X.
0.04 2e-3 44 At5g08520 830751 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFB C.G. S.X.
0.02 2e-3 44 At5g28300 832914 trihelix DNA-binding protein, putative F:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBVA C.G. S.X.
0.03 2e-3 44 At1g45230 841096 defective chloroplasts and leaves protein-related / DCL protein-related F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB C.G. S.X.
0.01 7e-3 42 At5g46880 834733 HB-7 (HOMEOBOX-7) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOB C.G. S.X.
0.02 7e-3 42 At5g61260 836247 chromosome scaffold protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 1e-11 71 Glycine max GmaAffx.91338.1.S1_at CF807063 - - 4e-12 At1g73010 phosphatase C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig4017_s_at Contig4017 - - 1e+0 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) C.G. S.X.
0.07 4e-6 54 Oryza sativa Os01g0720400 AK061237.1 - HAD-superfamily subfamily IB hydrolase,hypothetical 1 protein 2e-6 At1g73010 phosphatase C.G. S.X.
0.33 4e-14 79 Populus trichocarpa Ptp.6681.1.S1_at BI125981 hypothetical protein - 4e-14 At1g73010 phosphatase C.G. S.X.
0.10 2e-6 54 Triticum aestivum TaAffx.84901.1.S1_at CA627384 - - 1e-6 At1g73010 phosphatase C.G. S.X.
0.06 8e-3 40 Vitis vinifera 1613562_at CF210939 hypothetical protein LOC100247400 - 3e-2 At1g73010 phosphatase C.G. S.X.
0.09 8e-7 54 Zea mays Zm.13595.1.A1_at AY107750.1 phosphatase phospho1 - 2e-6 At1g73010 phosphatase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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