Gene omics information

Query gene ID At1g72940
Gene name disease resistance protein (TIR-NBS class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g72940843625disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBS.X.H.G.
0.7486.1At5g22250832285CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOFS.X.H.G.
0.6882.2At3g55980824764SZF1 (SALT-INDUCIBLE ZINC FINGER 1)F:transcription factor activity;P:response to chitin, regulation of transcription;C:cellular_component unknown;MOPBFAVS.X.H.G.
0.6478.9At5g66210836753CPK28member of Calcium Dependent Protein KinaseS.X.H.G.
0.6478.9At2g38470818429WRKY33Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.S.X.H.G.
0.6378.1At4g27280828836calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:unknown;MPOFS.X.H.G.
0.6277.3At5g41740834177disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAS.X.H.G.
0.6176.7At5g04340830313ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6)putative c2h2 zinc finger transcription factor mRNA,S.X.H.G.
0.6176.7At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOS.X.H.G.
0.6075.7At2g26530817194AR781unknown functionS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
131.199.9GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutants
124.599.9GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
115.299.9GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
105.999.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
94.099.9GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutants
93.699.9GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
92.999.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
85.099.9E-MEXP-807-raw-cel-1173273088
80.799.9E-MEXP-807-raw-cel-1173273170
80.699.9E-MEXP-807-raw-cel-1173273252
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6901201At1g72920843623disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:response to wounding, defense response;C:intrinsic to membrane;PBC.G.S.X.
0.808e-176617At1g72950843626disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMC.G.S.X.
0.772e-120432At1g72900843621disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOC.G.S.X.
0.433e-95349At1g72930843624TIR (TOLL/INTERLEUKIN-1 RECEPTOR-LIKE)Toll/interleukin-1 receptor-like protein (TIR) mRNA,C.G.S.X.
0.592e-90333At1g72910843622disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOC.G.S.X.
0.306e-1375At1g17615838338disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMOC.G.S.X.
0.016e-446At4g09430826526disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:chloroplast;PMBOFAVC.G.S.X.
0.082e-344At1g72890843620disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxPsAffx.psML007xN09f_atPsAffx.psML007xN09f--6e-1At1g72940disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.031e+034Hordeum vulgareContig4754_s_atContig4754--2e-17At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.021e+036Oryza sativaOs07g0172500AK068132.1-DNA-directed RNA polymerase II 13.6 kDapolypeptide (EC 2.7.7.6)2e+0At3g52090NRPB11C.G.S.X.
0.035e-240Populus trichocarpaPtpAffx.225310.1.S1_s_atpmrna44568hypothetical protein /// tir-nbs-lrr resistance protein-1e-2At1g72920disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.041e-138Triticum aestivumTaAffx.37585.1.S1_x_atBJ267502--1e+0At1g72920disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.033e+032Vitis vinifera1621239_atCF517123--2e+0At4g13266unknown proteinC.G.S.X.
0.021e-240Zea maysZm.4216.1.A1_atAW066666peptidyl-prolyl isomerase PASTICCINO1-2e-9At3g54010PAS1 (PASTICCINO 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage