Gene omics information

Query gene ID At1g72520
Gene name lipoxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6680.1At1g72520843584lipoxygenase, putativeF:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFOS.X.H.G.
0.8491.9At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.7888.6At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.7888.6At1g69930843329ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.7888.6At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.7788.0At5g12340831109unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.7788.0At3g23250821904MYB15 (MYB DOMAIN PROTEIN 15)Member of the R2R3 factor gene family.S.X.H.G.
0.7687.4At1g35210840410unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
0.7687.4At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
305.9100.0E-MEXP-807-raw-cel-1173273144
286.7100.0E-MEXP-807-raw-cel-1173273252
142.699.9E-MEXP-807-raw-cel-1173273060
126.099.9E-MEXP-807-raw-cel-1173273170
124.299.9E-MEXP-807-raw-cel-1173273116
114.699.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
105.999.9E-MEXP-807-raw-cel-1173273223
104.099.9GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
102.399.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
100.499.9GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.721e-179630At1g17420838314LOX3LipoxygenaseC.G.S.X.
0.011e-346At1g55020841944LOX1lipoxygenase, a defense gene conferring resistance Xanthomonas campestrisC.G.S.X.
0.019e-240At5g22090832270unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOPFBVC.G.S.X.
0.019e-240At2g33010817863ubiquitin-associated (UBA)/TS-N domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFC.G.S.X.
0.014e-138At3g45140823650LOX2 (LIPOXYGENASE 2)Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.C.G.S.X.
0.014e-138At1g67560843077lipoxygenase family proteinF:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth;C:chloroplast;PMBFOC.G.S.X.
0.011e+036At5g45200834556disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.068e-344Glycine maxGmaAffx.60245.1.S1_atAW317569--2e-3At1g72520lipoxygenase, putativeC.G.S.X.
0.042e-448Hordeum vulgareContig18600_atContig18600--8e-5At1g72520lipoxygenase, putativeC.G.S.X.
0.087e-448Oryza sativaOs03g0179900AK121637.1-Lipoxygenase (EC 1.13.11.12)4e-4At1g72520lipoxygenase, putativeC.G.S.X.
0.062e-346Populus trichocarpaPtpAffx.118982.1.S1_atCA930199--5e-4At1g72520lipoxygenase, putativeC.G.S.X.
0.024e-757Triticum aestivumTa.9742.1.S1_atCK192897--4e-7At1g72520lipoxygenase, putativeC.G.S.X.
0.023e-240Vitis vinifera1617922_atCF405309hypothetical protein LOC100241150-4e+0At4g09960STK (SEEDSTICK)C.G.S.X.
0.022e-448Zea maysZm.3303.1.A1_x_atAF271894.1lipoxygenase-6e-6At3g22400LOX5C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
XGO:0009617A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
XGO:0010193A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.
SGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
SGO:0009695The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.
SGO:0040007The increase in size or mass of an entire organism, a part of an organism or a cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00056Link to KaPPA-View 4Jasmonic acid biosynthesis
00102Link to KaPPA-View 4Linolenic acid metabolism (plastidial pathway)
00432Link to KaPPA-View 4Linoleic acid metabolism (Plastidial pathway)



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00592Link to KEGG PATHWAYalpha-Linolenic acid metabolism
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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