Gene omics information

Query gene ID At1g72180
Gene name leucine-rich repeat transmembrane protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g72180843550leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.3948.4At1g65960842908GAD2 (GLUTAMATE DECARBOXYLASE 2)glutamate decarboxylase (GAD2)S.X.H.G.
0.3846.7At5g15410831393DND1 (DEFENSE NO DEATH 1)'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.S.X.H.G.
0.3846.7At4g04340825754early-responsive to dehydration protein-related / ERD protein-relatedF:unknown;P:unknown;C:plasma membrane;FPMOBS.X.H.G.
0.3745.0At1g31420840032FEI1 (FEI 1)Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.S.X.H.G.
0.3643.6At3g56050824771protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFVAS.X.H.G.
0.3541.6At5g33280833300chloride channel-like (CLC) protein, putativeF:anion channel activity, voltage-gated chloride channel activity;P:chloride transport;C:intracellular, membrane;BMOFPAS.X.H.G.
0.3541.6At1g48450841266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.3541.6At1g69390843271ATMINE1 (Arabidopsis homologue of bacterial MinE 1)Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.S.X.H.G.
0.3439.8At3g60320825203DNA bindingF:DNA binding;P:biological_process unknown;C:cellular_component unknown;OMPFBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.799.7E-ATMX-6-raw-cel-1308219150
28.199.7GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
27.499.7E-ATMX-6-raw-cel-1308219121
22.599.6E-MEXP-98-raw-cel-320189024
20.799.6E-MEXP-98-raw-cel-320188804
16.499.5GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
15.699.5GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
14.699.4E-MEXP-1451-raw-cel-1585200362
13.599.4GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
11.699.3GSM128655Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-654At4g29990829122light repressible receptor protein kinaseF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.013e-552At5g48380834892leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.033e-552At2g35620818130FEI2 (FEI 2)Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.C.G.S.X.
0.023e-552At1g06700837180serine/threonine protein kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.013e-552At1g51880841615leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.013e-552At1g79620844301leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.011e-450At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.011e-450At1g09440837467protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-861Glycine maxGma.12732.2.S1_atBE607988--7e-9At1g72180leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.035e-550Hordeum vulgareContig15714_atContig15714--2e-6At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)C.G.S.X.
0.032e-759Oryza sativaOs01g0878300AK069324.1-Protein kinase domain containing protein1e-7At1g72180leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.042e-346Populus trichocarpaPtpAffx.76197.1.A1_atCV241208--2e-27At2g35620FEI2 (FEI 2)C.G.S.X.
0.021e-140Triticum aestivumTa.7448.1.A1_atBJ320729--1e-3At1g06700serine/threonine protein kinase, putativeC.G.S.X.
0.075e-1065Vitis vinifera1619975_atCF208647hypothetical LOC100260256-5e-10At1g72180leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.021e-552Zea maysZmAffx.905.1.A1_atAI770915--2e-13At1g06700serine/threonine protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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