CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g72060

Gene name serine-type endopeptidase inhibitor

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g72060 843537 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:response to oxidative stress;C:endomembrane system;P S.X. H.G.
0.21 15.8 At1g22890 838896 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.12 4.9 At2g15960 816091 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.03 0.6 At2g45170 819125 AtATG8e Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes. S.X. H.G.
0.03 0.6 At3g26220 822223 CYP71B3 cytochrome P450 monooxygenase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
114.4 99.9 E-MEXP-1443-raw-cel-1581869632
96.5 99.9 E-MEXP-509-raw-cel-829148129
95.6 99.9 GSM268245 dor-drought-1, biological rep 1 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
93.9 99.9 GSM77182 00h pgm (Col-0) mutant replicate B GSE3424 Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
92.0 99.9 GSM253165 48h into an extended nightB GSE10016 Expression data of Arabidopsis thaliana rosettes in an extended night
87.0 99.9 GSM268247 WT-drought-1, biological rep 1 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
79.3 99.9 E-MEXP-509-raw-cel-829148240
74.5 99.9 E-MEXP-509-raw-cel-829148090
67.0 99.8 E-MEXP-1094-raw-cel-1379507313
65.7 99.8 GSM253162 8h into an extended nightB GSE10016 Expression data of Arabidopsis thaliana rosettes in an extended night
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 5e-1 34 At3g66652 819846 fip1 motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPB C.G. S.X.
0.02 5e-1 34 At1g14370 837999 APK2A (PROTEIN KINASE 2A) Encodes protein kinase APK2a. C.G. S.X.
0.02 2e+0 32 At5g46370 834680 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2) Encodes AtTPK2 (KCO2), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK2 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo. C.G. S.X.
0.05 2e+0 32 At3g30580 822772 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF C.G. S.X.
0.02 2e+0 32 At3g47170 823870 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO C.G. S.X.
0.03 2e+0 32 At3g23260 821905 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.02 2e+0 32 At2g31990 817758 exostosin family protein F:catalytic activity;P:biological_process unknown;C:membrane;POMFV C.G. S.X.
0.01 2e+0 32 At2g25560 817094 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-1 34 Glycine max GmaAffx.31701.1.S1_at BG362860 - - 6e-1 At1g72060 serine-type endopeptidase inhibitor C.G. S.X.
0.02 4e+0 30 Hordeum vulgare Contig15128_at Contig15128 - - 5e-41 At2g47390 serine-type endopeptidase/ serine-type peptidase C.G. S.X.
Os08g0371300 0.05 2e-1 Oryza sativa Os01g0371700 - - - 0 C.G. S.X.
0.06 2e-1 36 Populus trichocarpa PtpAffx.105119.1.S1_at BI138189 hypothetical protein - 8e-13 At3g62590 lipase class 3 family protein C.G. S.X.
0.08 2e+0 32 Triticum aestivum Ta.21709.1.S1_at CA698840 - - 2e+0 At1g72060 serine-type endopeptidase inhibitor C.G. S.X.
0.04 2e+0 30 Vitis vinifera 1615559_at CF414134 hypothetical protein LOC100251570 - 2e-1 At5g44830 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
0.03 3e+0 30 Zea mays Zm.17357.1.S1_at CK370769 - - 5e+0 At1g29195 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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