Gene omics information

Query gene ID At1g71350
Gene name eukaryotic translation initiation factor SUI1 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g71350843476eukaryotic translation initiation factor SUI1 family proteinF:RNA binding, translation initiation factor activity;P:translational initiation;C:unknown;MFOPAS.X.H.G.
0.8592.4At3g03110821074XPO1BEncodes a member of the exportin family (XPO1B)which function as receptors for nuclear transport.Along with XPO1A involved in the development of male and female gametophytes.S.X.H.G.
0.7083.5At1g47570841166zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVS.X.H.G.
0.6982.9At2g39760818561BPM3F:protein binding;P:biological_process unknown;C:unknown;MPOFVS.X.H.G.
0.6781.6At5g55300835623TOP1ALPHA (DNA TOPOISOMERASE I ALPHA)Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition.S.X.H.G.
0.6378.1At5g65000836624nucleotide-sugar transporter family proteinF:nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity;P:carbohydrate transport, nucleotide-sugar transport;C:integral to membrane, Golgi membrane;MPOFABS.X.H.G.
0.6378.1At5g49220834982unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5570.6At3g24200822006FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygenF:oxidoreductase activity, monooxygenase activity, FAD binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;P:ubiquinone biosynthetic process, metabolic process;C:unknown;BOFMPAS.X.H.G.
0.5570.6At1g04790839412zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.5368.6At1g04230839575unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
197.1100.0E-ATMX-35-raw-cel-1574334832
143.299.9E-ATMX-35-raw-cel-1574334816
135.999.9E-ATMX-35-raw-cel-1574334800
72.599.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
60.999.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
36.099.7GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
17.999.5GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seeds
16.099.5GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seeds
14.299.4E-MEXP-849-raw-cel-1181980998
13.199.4GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At4g02450828006glycine-rich proteinF:molecular_function unknown;P:unknown;C:plasma membrane;BMOPFVAC.G.S.X.
0.012e-138At3g28490822479oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:endomembrane system;MOPBFVC.G.S.X.
0.012e-138At2g33600817926cinnamoyl-CoA reductase familyF:coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, cellular metabolic process, metabolic process;C:unknown;BOPFMAVC.G.S.X.
0.012e-138At1g02660839544lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;MOFPBVC.G.S.X.
0.029e-136At4g24070828507carbon-carbon lyaseF:carbon-carbon lyase activity;P:cellular aromatic compound metabolic process;C:cellular_component unknown;PC.G.S.X.
0.029e-136At3g513252745959zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMOFC.G.S.X.
0.019e-136At3g55650824731pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:mitochondrion;BOMPFAC.G.S.X.
0.019e-136At3g55810824747pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:unknown;BOMPFAC.G.S.X.
0.019e-136At3g01920821220yrdC family proteinF:unknown;P:biological_process unknown;C:unknown;BOAMFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-24115Glycine maxGma.10528.1.S1_atBM270365--6e-25At1g71350eukaryotic translation initiation factor SUI1 family proteinC.G.S.X.
0.022e+034Hordeum vulgareHVSMEc0001M13f_x_atHVSMEc0001M13f--4e-1At1g19980cytomatrix protein-relatedC.G.S.X.
0.072e-346Oryza sativaOs02g0557600CA760647-Translation initiation factor SUI1 family protein3e+0At4g37860-C.G.S.X.
0.174e-22107Populus trichocarpaPtpAffx.84152.1.A1_s_atCK097049hypothetical protein-1e-22At1g71350eukaryotic translation initiation factor SUI1 family proteinC.G.S.X.
0.014e+034Triticum aestivumTaAffx.27282.1.S1_atCA678809--1e+0At5g02502unknown proteinC.G.S.X.
0.111e-1893Vitis vinifera1618321_atCB982883hypothetical protein LOC100260152-1e-18At1g71350eukaryotic translation initiation factor SUI1 family proteinC.G.S.X.
0.053e-240Zea maysZmAffx.453.1.S1_atAI677167--1e-2At1g71350eukaryotic translation initiation factor SUI1 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006413The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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