CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g71140

Gene name MATE efflux family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g71140 843454 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:plasma membrane, membrane;BOPFMA S.X. H.G.
0.38 46.7 At1g76520 843985 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFOB S.X. H.G.
0.21 15.8 At4g22260 828321 IM (IMMUTANS) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues. S.X. H.G.
0.19 12.7 At3g01170 820469 structural constituent of ribosome F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, chloroplast;P S.X. H.G.
0.07 1.9 At5g07910 830685 leucine-rich repeat family protein F:protein binding;P:N-terminal protein myristoylation;C:plasma membrane;MPBOFA S.X. H.G.
0.02 0.4 At1g76150 843947 maoC-like dehydratase domain-containing protein Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
70.8 99.9 GSM131606 ATGE_42_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
61.8 99.8 GSM131608 ATGE_42_D GSE5632 AtGenExpress: Developmental series (flowers and pollen)
57.9 99.8 GSM133030 BC482-2 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
55.2 99.8 GSM133958 Fukuda_1-3_2A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
52.2 99.8 GSM133707 Short_1-3_ozone_Rep2_ATH1 GSE5722 Functional Genomics of Ozone Stress in Arabidopsis.
51.3 99.8 GSM131607 ATGE_42_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
50.5 99.8 GSM133959 Fukuda_1-4_2B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
42.2 99.8 GSM133965 Fukuda_1-10_8B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
41.6 99.8 GSM133029 BC482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
41.6 99.8 GSM133966 Fukuda_1-11_10A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.08 5e-5 50 At1g15150 838080 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA C.G. S.X.
0.08 8e-4 46 At1g15180 838084 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA C.G. S.X.
0.02 3e-3 44 At4g00350 827306 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA C.G. S.X.
0.03 1e-2 42 At1g66760 842994 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA C.G. S.X.
0.04 1e-2 42 At1g15170 838083 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMA C.G. S.X.
0.05 1e-2 42 At1g33080 840204 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-4 48 Glycine max GmaAffx.27474.1.S1_at AW597322 - - 1e-4 At1g71140 MATE efflux family protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HW04O09u_at HW04O09u - - 8e+0 At5g26140 lysine decarboxylase family protein C.G. S.X.
0.03 1e+0 36 Oryza sativa Os10g0344600 NM_195889.1 - - 5e-1 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.14 5e-9 63 Populus trichocarpa PtpAffx.208904.1.S1_at pmrna17664 hypothetical protein - 5e-14 At1g15150 MATE efflux family protein C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.4673.1.S1_at BJ269890 - - 4e-1 At5g51250 kelch repeat-containing F-box family protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1612344_at CF209694 - - 4e-1 At4g04632 ATP binding / protein kinase C.G. S.X.
0.02 1e+0 34 Zea mays Zm.12381.2.S1_x_at CF637259 - - 2e-1 At1g11270 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006855 The directed movement of drugs across a membrane into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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