CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g70880

Gene name Bet v I allergen family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g70880 843425 Bet v I allergen family protein F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.97 97.6 At5g37450 833722 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.89 94.6 At5g04730 830351 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.86 93.1 At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. S.X. H.G.
0.86 93.1 At4g08620 826426 SULTR1 High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane. S.X. H.G.
0.85 92.4 At1g33840 840280 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
0.85 92.4 At1g49860 841409 ATGSTF14 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
0.79 89.1 At1g26250 839166 proline-rich extensin, putative F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA S.X. H.G.
0.75 86.9 At4g07820 826263 pathogenesis-related protein, putative F:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBO S.X. H.G.
0.74 86.1 At1g11540 837697 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
235.8 100.0 E-MEXP-828-raw-cel-1156922684
206.3 100.0 E-MEXP-828-raw-cel-1156922905
178.3 100.0 E-MEXP-828-raw-cel-1156922572
173.3 100.0 E-MEXP-828-raw-cel-1156922485
162.5 99.9 E-MEXP-828-raw-cel-1156922987
160.9 99.9 E-MEXP-828-raw-cel-1156922533
153.9 99.9 E-MEXP-828-raw-cel-1156922613
142.1 99.9 E-MEXP-828-raw-cel-1156922944
141.7 99.9 E-MEXP-828-raw-cel-1156922708
138.3 99.9 E-MEXP-828-raw-cel-1156922809
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.34 2e-38 159 At1g70850 843422 MLP34 (MLP-LIKE PROTEIN 34) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.31 2e-26 119 At1g70830 843420 MLP28 (MLP-LIKE PROTEIN 28) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PF C.G. S.X.
0.60 1e-24 113 At1g70840 843421 MLP31 (MLP-LIKE PROTEIN 31) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Glycine max GmaAffx.67613.1.S1_at BF597420 - - 5e-12 At1g61770 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig15481_at Contig15481 - - 2e+0 At3g54170 ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37) C.G. S.X.
0.03 2e+0 34 Oryza sativa Os10g0193100 CA755860 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 1e+0 At2g22800 HAT9 C.G. S.X.
0.03 1e+0 34 Populus trichocarpa PtpAffx.7604.2.A1_at CV232190 - - 4e-1 At1g70350 unknown protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum Ta.5331.2.A1_at BJ282570 - - 7e-1 At1g70880 Bet v I allergen family protein C.G. S.X.
0.03 4e+0 30 Vitis vinifera 1618366_a_at CF208481 - - 1e+0 At4g13440 calcium-binding EF hand family protein C.G. S.X.
0.04 6e+0 30 Zea mays ZmAffx.1478.1.S1_at 40794996-105 - - 1e+1 At5g26673 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
L GO:0009607 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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