CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g70820

Gene name phosphoglucomutase, putative / glucose phosphomutase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At1g70820 843419 phosphoglucomutase, putative / glucose phosphomutase, putative F:intramolecular transferase activity, phosphotransferases;P:carbohydrate metabolic process;C:chloroplast;BOAMPF S.X. H.G.
0.35 41.6 At2g03310 814860 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.33 38.1 At4g04330 825753 unknown protein F:unknown;P:unknown;C:unknown;BPO S.X. H.G.
0.33 38.1 At4g32340 829368 - F:unknown;P:unknown;C:unknown;MPBOFVA S.X. H.G.
0.20 14.4 At4g26530 828759 fructose-bisphosphate aldolase, putative F:fructose-bisphosphate aldolase activity;P:glycolysis, metabolic process;C:chloroplast;OMBPF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.9 99.7 E-ATMX-35-raw-cel-1574334896
36.8 99.7 E-ATMX-35-raw-cel-1574334928
29.7 99.7 GSM131372 AtGen_6-5412_Genotoxicstress-Shoots-6.0h_Rep2 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
28.9 99.7 GSM131347 AtGen_6-4411_Droughtstress-Shoots-6.0h_Rep1 GSE5624 AtGenExpress: Stress Treatments (Drought stress)
28.3 99.7 E-ATMX-6-raw-cel-1308219150
26.2 99.7 GSM131295 AtGen_6-2411_Osmoticstress-Shoots-6.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
26.1 99.7 GSM269830 T6 leaf-well watered-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
26.1 99.7 GSM269822 T6 leaf-well watered-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.8 99.6 GSM269816 T8 leaf-well watered-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
22.8 99.6 GSM131348 AtGen_6-4412_Droughtstress-Shoots-6.0h_Rep2 GSE5624 AtGenExpress: Stress Treatments (Drought stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e-1 38 At1g51680 841593 4CL1 (4-COUMARATE:COA LIGASE 1) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate. C.G. S.X.
0.01 9e-1 36 At5g47860 834837 unknown protein F:unknown;P:unknown;C:chloroplast;OBP C.G. S.X.
0.01 9e-1 36 At5g17530 831619 phosphoglucosamine mutase family protein F:intramolecular transferase activity, phosphotransferases;P:carbohydrate metabolic process;C:chloroplast;BOAMFP C.G. S.X.
0.01 9e-1 36 At3g54360 824603 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:unknown;C:unknown;MBOPAFV C.G. S.X.
0.01 4e+0 34 At5g56040 835702 leucine-rich repeat protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 4e-22 107 Glycine max GmaAffx.20654.1.S1_at AI930800 - - 7e-23 At1g70820 phosphoglucomutase, putative / glucose phosphomutase, putative C.G. S.X.
0.02 4e-1 36 Hordeum vulgare Contig7461_s_at Contig7461 - - 9e-1 At3g60800 zinc finger (DHHC type) family protein C.G. S.X.
0.10 2e-6 56 Oryza sativa Os06g0476200 AK065566.1 - Phosphoglucomutase precursor (EC 5.4.2.2) 5e-2 At1g70820 phosphoglucomutase, putative / glucose phosphomutase, putative C.G. S.X.
0.05 6e-6 54 Populus trichocarpa PtpAffx.118623.2.S1_at BI072874 hypothetical protein - 3e-6 At1g70820 phosphoglucomutase, putative / glucose phosphomutase, putative C.G. S.X.
0.02 6e-2 40 Triticum aestivum TaAffx.81759.1.S1_at CA682243 - - 4e+0 At2g44080 ARL (ARGOS-LIKE) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1616595_at CB972324 hypothetical protein LOC100251282 - 4e+0 At4g22165 F-box family protein C.G. S.X.
0.02 4e-1 36 Zea mays Zm.2051.1.A1_at CF629902 - - 5e-12 At5g17530 phosphoglucosamine mutase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00020 Hexose phosphate pool

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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