CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g70720

Gene name invertase/pectin methylesterase inhibitor family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g70720 843409 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.86 93.1 At1g61680 842465 TPS14 (TERPENE SYNTHASE 14) F:S-linalool synthase activity;P:monoterpene biosynthetic process;C:plastid;PO S.X. H.G.
0.80 89.8 At1g22380 838845 AtUGT85A3 (UDP-glucosyl transferase 85A3) F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF S.X. H.G.
0.78 88.6 At2g24210 816955 TPS10 (terpene synthase 10) F:myrcene synthase activity, (E)-beta-ocimene synthase activity;P:response to jasmonic acid stimulus, monoterpenoid biosynthetic process, response to wounding;C:unknown;PO S.X. H.G.
0.78 88.6 At1g35310 840420 MLP168 (MLP-LIKE PROTEIN 168) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.76 87.4 At1g66120 842926 acyl-activating enzyme 11 (AAE11) F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV S.X. H.G.
0.73 85.5 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A S.X. H.G.
0.70 83.5 At3g55290 824695 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV S.X. H.G.
0.67 81.6 At2g17845 816294 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV S.X. H.G.
0.67 81.6 At3g01980 821069 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOFMPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
857.3 100.0 GSM131606 ATGE_42_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
772.2 100.0 GSM131607 ATGE_42_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
588.9 100.0 GSM131608 ATGE_42_D GSE5632 AtGenExpress: Developmental series (flowers and pollen)
298.7 100.0 GSM131588 ATGE_35_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
296.1 100.0 GSM131589 ATGE_35_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
253.0 100.0 GSM131590 ATGE_35_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
142.8 99.9 GSM128733 Hennig_1-5_flowers-CK_021114_2_B_Rep2_ATH1 GSE5526 Transcriptional Programs of Early Reproductive Stages in Arabidopsis
106.4 99.9 E-MEXP-285-raw-cel-440783335
87.3 99.9 GSM62696 Columbia flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression
69.5 99.9 E-MEXP-285-raw-cel-440783273
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.37 1e-22 107 At1g23205 838929 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.00 2e-2 40 At4g02660 828210 WD-40 repeat family protein / beige-related F:binding;P:signal transduction;C:chloroplast;MBOFPA C.G. S.X.
0.03 2e-2 40 At2g01610 814690 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.02 2e-2 40 At1g12850 837842 phosphoglycerate/bisphosphoglycerate mutase family protein F:catalytic activity;P:N-terminal protein myristoylation, metabolic process;C:cellular_component unknown;BMOPFAV C.G. S.X.
0.03 3e-1 36 At5g51520 835226 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;P C.G. S.X.
0.01 3e-1 36 At1g19850 838573 MP (MONOPTEROS) Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder. C.G. S.X.
0.01 1e+0 34 At5g61940 836315 ubiquitin carboxyl-terminal hydrolase-related F:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;OPMFB C.G. S.X.
0.01 1e+0 34 At5g61950 836316 ubiquitin carboxyl-terminal hydrolase-related F:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;MOPFB C.G. S.X.
0.01 1e+0 34 At4g30790 829202 unknown protein F:unknown;P:biological_process unknown;C:unknown;MOFBPAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-3 44 Glycine max GmaAffx.91012.1.S1_s_at CF806737 - - 2e-9 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig171_at Contig171 - - 6e-3 At1g19730 ATTRX4 C.G. S.X.
0.04 1e-1 38 Oryza sativa Os07g0424720 9635.m02312 - - 6e-2 At1g70720 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.73634.1.S1_s_at DN502654 hypothetical protein - 6e-55 At2g47500 ATP binding / microtubule motor C.G. S.X.
0.04 5e+0 32 Triticum aestivum TaAffx.114252.1.S1_at CA596126 - - 1e+0 At5g11190 SHN3 (shine3) C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1616388_at CF209145 hypothetical protein LOC100241550 - 2e-29 At1g73720 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.03 8e+0 30 Zea mays ZmAffx.1054.1.A1_at AI881862 - - 8e-1 At3g10990 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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