Gene omics information

Query gene ID At1g70710
Gene name ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At1g70710843408ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)endo-1,4-beta-glucanase. Involved in cell elongation.S.X.H.G.
0.4963.5At5g48480834903unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOS.X.H.G.
0.4761.2At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.4659.8At2g28790817428osmotin-like protein, putativeF:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBOS.X.H.G.
0.4659.8At5g07280830619EMS1 (EXCESS MICROSPOROCYTES1)Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ems1 mutants lack the tapetum. Acts as regulator of anther cell differentiationS.X.H.G.
0.4152.4At2g32765817837SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5)Encodes a small ubiquitin-like modifier (SUMO) protein that becomes covalently attached to various intracellular protein targets through an isopeptide bond. SUMOylation typically has a post-translational effect on the behavior of the target protein.S.X.H.G.
0.4152.4At3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVAS.X.H.G.
0.4152.4At4g36180829775leucine-rich repeat family proteinF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.3643.6At3g22790821850kinase interacting family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVS.X.H.G.
0.3643.6At5g51750835249ATSBT1.3 (ARABIDOPSIS THALIANA SUBTILASE 1.3)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPFOAMS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
83.299.9GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
82.399.9GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
81.199.9GSM10478lec1-1 24-Hr Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
70.199.9GSM10441WT Ovule 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
69.599.9GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
64.399.8E-MEXP-265-raw-cel-414617783
60.999.8GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
56.099.8GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
49.899.8E-MEXP-265-raw-cel-414617890
44.999.8GSM133769Lindsey_1-21_torpedo-basal_Rep6_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.738e-118424At1g23210838930AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.141e-861At4g02290828080AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.091e-861At4g39010830056AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.111e-861At1g02800839385ATCEL2Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia.C.G.S.X.
0.101e-552At4g39000830055AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.031e-552At2g44550819063AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.055e-550At4g11050826706AtGH9C3 (Arabidopsis thaliana glycosyl hydrolase 9C3)F:carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.072e-448At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFC.G.S.X.
0.058e-446At1g22880838893CEL5 (CELLULASE 5)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-448Glycine maxGmaAffx.79075.1.S1_atBE824264endo-1,4-beta-glucanase precursor-3e-2At4g39010AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)C.G.S.X.
0.052e-240Hordeum vulgareContig18702_atContig18702--2e-2At1g70710ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)C.G.S.X.
0.076e-963Oryza sativaOs02g0733300AK101108.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-15At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)C.G.S.X.
0.291e-58228Populus trichocarpaPtpAffx.46431.1.S1_atCK114145hypothetical protein-8e-59At1g70710ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)C.G.S.X.
0.065e-859Triticum aestivumTa.30649.1.S1_atCK207150hypothetical LOC543015-2e-3At4g39010AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)C.G.S.X.
0.029e-134Vitis vinifera1620399_atCF372460hypothetical protein LOC100249054-8e-2At3g08700UBC12 (ubiquitin-conjugating enzyme 12)C.G.S.X.
0.041e-344Zea maysZm.13537.1.S1_atAY108307.1hypothetical protein LOC100216867-1e-9At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0042547The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase
00435Link to KaPPA-View 4Cellulose degradation
00438Link to KaPPA-View 4Xyloglucan degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage