CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g70610

Gene name ATTAP1

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.84 91.9 At1g70610 843398 ATTAP1 member of TAP subfamily S.X. H.G.
0.82 90.9 At5g26820 832740 ATIREG3 (IRON-REGULATED PROTEIN 3) F:unknown;P:unknown;C:membrane;MPFOB S.X. H.G.
0.75 86.9 At1g12640 837820 membrane bound O-acyl transferase (MBOAT) family protein F:acyltransferase activity;P:biological_process unknown;C:plasma membrane, membrane;MBOFP S.X. H.G.
0.75 86.9 At2g02090 814740 ETL1 F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:chloroplast;BMOFPVA S.X. H.G.
0.72 84.8 At1g17040 838274 SHA (SH2 DOMAIN PROTEIN A) Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor. S.X. H.G.
0.72 84.8 At3g07020 819887 UDP-glucose:sterol glucosyltransferase (UGT80A2) F:transferase activity, transferring glycosyl groups;P:lipid glycosylation, carbohydrate metabolic process, metabolic process;C:plasma membrane, membrane;BMFPOV S.X. H.G.
0.72 84.8 At3g07400 819928 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;PFOMB S.X. H.G.
0.71 84.2 At4g02730 828189 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFOPBAV S.X. H.G.
0.71 84.2 At3g06190 819793 BPM2 (BTB-POZ AND MATH DOMAIN 2) F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOF S.X. H.G.
0.70 83.5 At5g64930 836617 CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR). S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
563.6 100.0 E-ATMX-35-raw-cel-1574334816
255.6 100.0 E-ATMX-35-raw-cel-1574334832
206.2 100.0 E-ATMX-35-raw-cel-1574334800
32.9 99.7 E-MEXP-285-raw-cel-440782938
30.0 99.7 E-MEXP-285-raw-cel-440782853
20.9 99.6 GSM318330 EL_14DAS_1 GSE12676 Arabidopsis thaliana Ler developmental series
17.6 99.5 E-ATMX-33-raw-cel-1562596310
17.1 99.5 GSM184151 ATR1_OE_rep2 GSE7570 ATR1_like_Clade_OE_and_miR
16.8 99.5 GSM318345 ML_35DAS_2 GSE12676 Arabidopsis thaliana Ler developmental series
16.2 99.5 E-ATMX-35-raw-cel-1574334896
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 4e-3 44 At4g25450 828650 ATNAP8 member of NAP subfamily C.G. S.X.
0.02 2e-2 42 At5g39040 833896 ATTAP2 member of TAP subfamily C.G. S.X.
0.03 2e-2 42 At4g33460 829483 ATNAP13 member of NAP subfamily C.G. S.X.
0.01 7e-2 40 At1g28010 839694 PGP14 (P-GLYCOPROTEIN 14) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
0.01 3e-1 38 At5g13130 831152 ATP binding F:ATP binding;P:biological_process unknown;C:cellular_component unknown;MOPVBFA C.G. S.X.
0.01 1e+0 36 At1g68480 843177 JAG (JAGGED) Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development. C.G. S.X.
0.01 4e+0 34 At5g24290 832496 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 3e-20 101 Glycine max GmaAffx.52796.1.S1_at BI973264 - - 5e-21 At1g70610 ATTAP1 C.G. S.X.
0.04 2e-3 44 Hordeum vulgare Contig14369_at Contig14369 - - 3e-3 At1g70610 ATTAP1 C.G. S.X.
0.10 1e-4 50 Oryza sativa Os01g0911300 AK058462.1 - Multidrug resistance protein 2 (P-glycoprotein 2) 7e-5 At1g70610 ATTAP1 C.G. S.X.
0.39 3e-32 141 Populus trichocarpa PtpAffx.208676.1.S1_at pmrna17209 ABC transporter family protein - 3e-32 At1g70610 ATTAP1 C.G. S.X.
0.03 2e-2 42 Triticum aestivum Ta.18606.1.S1_at CD452419 - - 2e-2 At2g36910 ABCB1 (ATP BINDING CASSETTE SUBFAMILY B1) C.G. S.X.
0.11 2e-21 103 Vitis vinifera 1612049_at CD007708 - - 2e-21 At1g70610 ATTAP1 C.G. S.X.
0.09 3e-11 69 Zea mays Zm.4236.1.A1_at AI978036 - - 5e-11 At1g70610 ATTAP1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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