Gene omics information

Query gene ID At1g70420
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g70420843378unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.3338.1At2g38790818461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.3235.7At1g73500843685MKK9 (MAP KINASE KINASE 9)member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.S.X.H.G.
0.2319.3At5g47220834768ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.S.X.H.G.
0.2217.5At3g56710824838SIB1 (SIGMA FACTOR BINDING PROTEIN 1)Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts.S.X.H.G.
0.1912.7At2g36220818194unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.1710.2At1g76600843993unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:nucleolus, nucleus;PS.X.H.G.
0.103.4At1g69890843325-F:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.103.4At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
152.899.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
144.299.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
141.499.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
129.699.9GSM131271AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.329e-30131At1g23710838981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBC.G.S.X.
0.017e-342At5g20710832194BGAL7 (beta-galactosidase 7)F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PMBFOAC.G.S.X.
0.027e-342At4g27520828861plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:in 6 components;MOFBPVAC.G.S.X.
0.011e-138At5g67200836855leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.011e-138At4g38070829963bHLH family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:mitochondrion;MOBFPAVC.G.S.X.
0.011e-138At4g38590830016glycosyl hydrolase family 35 proteinputative beta-galactosidase (BGAL14 gene)C.G.S.X.
0.031e-138At2g39320818517OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.014e-136At5g37150833688-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPAVC.G.S.X.
0.014e-136At5g22800832343EMB1030 (EMBRYO DEFECTIVE 1030)F:alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding;P:embryonic development ending in seed dormancy, alanyl-tRNA aminoacylation;C:mitochondrion, chloroplast stroma, chloroplast, membrane;OBMAFPC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Glycine maxGmaAffx.88518.1.S1_atBU082072--2e+0At5g11120unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareContig4646_atContig4646--1e-8At2g37990ribosome biogenesis regulatory protein (RRS1) family proteinC.G.S.X.
0.038e-136Oryza sativaOs01g09177009629.m06846-PAK-box/P21-Rho-binding domain containing protein7e-2At1g70190ribosomal protein L12 family proteinC.G.S.X.
0.061e-552Populus trichocarpaPtpAffx.1225.1.S1_atCV238974hypothetical protein-1e-5At1g70420unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.24111.1.S1_atCA724857--2e-1At3g58600-C.G.S.X.
0.032e+032Vitis vinifera1618309_atCB968982AP1-like protein-6e+0At2g02050NADH-ubiquinone oxidoreductase B18 subunit, putativeC.G.S.X.
0.033e+032Zea maysZmAffx.21.1.A1_atAI600464--3e+0At5g05300unknown proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage