CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g70300

Gene name KUP6

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.38 46.7 At1g70300 843366 KUP6 potassium transporter S.X. H.G.
0.71 84.2 At1g62660 842563 beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole;BPFOMA S.X. H.G.
0.57 73.8 At4g21600 828246 ENDO5 (endonuclease 5) Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops). S.X. H.G.
0.57 73.8 At5g24290 832496 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVA S.X. H.G.
0.50 65.3 At1g47480 841155 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
0.50 65.3 At1g50560 841477 CYP705A25 member of CYP705A S.X. H.G.
0.43 55.3 At3g58710 825040 WRKY69 member of WRKY Transcription Factor; Group II-e S.X. H.G.
0.36 43.6 At3g16460 820894 jacalin lectin family protein F:copper ion binding;P:response to cold;C:cytosol, nucleus, membrane;BOMPFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.8 99.7 GSM265424 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
24.4 99.6 GSM226552 Slice10JW GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.6 99.6 GSM179972 Arabidopsis roots, mock treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.4 99.6 GSM226553 Slice11JW GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
22.8 99.6 GSM131212 AtGen_D-46_3-AS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
21.7 99.6 GSM131179 AtGen_D-11_1-PS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
21.6 99.6 GSM142755 MJ001_ATH1_A6-jones-RH-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
21.5 99.6 GSM184838 Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8 GSE7639 Expression analysis of root developmental zones after treatment with salt
20.9 99.6 GSM131178 AtGen_D-10_1-FS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
20.7 99.6 GSM265432 Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.41 4e-25 117 At5g14880 831340 potassium transporter, putative F:potassium ion transmembrane transporter activity;P:potassium ion transport;C:membrane;BPOFAV C.G. S.X.
0.05 1e-9 65 At2g30070 817558 ATKT1 (POTASSIUM TRANSPORTER 1) Encodes a high affinity potassium transporter. C.G. S.X.
0.05 2e-8 61 At4g23640 828464 TRH1 (TINY ROOT HAIR 1) Functions as a potassium transporter and is required for the establishment of root tip growth. C.G. S.X.
0.13 2e-8 61 At2g40540 818649 KT2 (POTASSIUM TRANSPORTER 2) putative potassium transporter AtKT2p (AtKT2) mRNA, C.G. S.X.
0.01 2e-2 42 At1g60160 842311 potassium transporter family protein F:potassium ion transmembrane transporter activity;P:potassium ion transport;C:chloroplast;BPOFAV C.G. S.X.
0.01 3e-1 38 At1g66220 842937 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 2e-21 105 Glycine max GmaAffx.69322.2.S1_at BI470205 - - 8e-14 At5g14880 potassium transporter, putative C.G. S.X.
0.04 1e-5 52 Hordeum vulgare Contig9472_at Contig9472 - - 2e-5 At1g70300 KUP6 C.G. S.X.
0.20 5e-26 121 Oryza sativa Os02g0730300 AK111629.1 - Potassium transporter 8 (AtPOT8) (AtHAK8) 3e-26 At1g70300 KUP6 C.G. S.X.
0.38 3e-20 101 Populus trichocarpa PtpAffx.39091.1.S1_at CF231045 hypothetical protein - 2e-20 At1g70300 KUP6 C.G. S.X.
0.14 2e-11 71 Triticum aestivum TaAffx.23645.1.S1_at CA732401 - - 5e-12 At1g70300 KUP6 C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1621202_at BQ792918 hypothetical protein LOC100267221 - 2e-11 At3g54390 transcription factor C.G. S.X.
0.21 2e-34 147 Zea mays Zm.6264.1.S1_at BG266134 Hypothetical protein LOC100191870 - 4e-34 At1g70300 KUP6 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006813 The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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