CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g69880

Gene name ATH8 (thioredoxin H-type 8)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.39 48.4 At1g69880 843324 ATH8 (thioredoxin H-type 8) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV S.X. H.G.
0.90 95.1 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
0.87 93.5 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
0.87 93.5 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO S.X. H.G.
0.83 91.4 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
0.78 88.6 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.76 87.4 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO S.X. H.G.
0.74 86.1 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. S.X. H.G.
0.72 84.8 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.71 84.2 At3g44520 - - - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
350.8 100.0 E-ATMX-31-raw-cel-1516947916
276.9 100.0 GSM142902 WW001_ATH1_A1-WILLA-CON GSE6181 Assembly of the cell wall pectic matrix.
247.9 100.0 E-MEXP-1797-raw-cel-1669768039
196.9 100.0 E-ATMX-31-raw-cel-1516947899
193.9 100.0 E-ATMX-31-raw-cel-1516948018
185.7 100.0 E-MEXP-1797-raw-cel-1669768030
179.0 100.0 E-ATMX-31-raw-cel-1516947882
157.4 99.9 E-MEXP-1797-raw-cel-1669767940
156.0 99.9 GSM142904 WW002_ATH1_A1-willa-CON-REP2 GSE6181 Assembly of the cell wall pectic matrix.
136.3 99.9 E-MEXP-1797-raw-cel-1669768066
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 2e-1 36 At5g64700 836591 nodulin MtN21 family protein F:molecular_function unknown;P:unknown;C:membrane;OBPAMF C.G. S.X.
0.01 2e-1 36 At3g06290 819803 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB C.G. S.X.
0.07 2e-1 36 At1g59730 842266 ATH7 (thioredoxin H-type 7) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV C.G. S.X.
0.01 9e-1 34 At1g52620 841694 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA C.G. S.X.
0.01 9e-1 34 At1g08420 837362 kelch repeat-containing protein / serine/threonine phosphoesterase family protein F:hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, iron ion binding;P:biological_process unknown;C:plasma membrane;MOPFBAV C.G. S.X.
0.02 9e-1 34 At1g11540 837697 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAP C.G. S.X.
0.02 3e+0 32 At5g12920 831132 - F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;PMBFO C.G. S.X.
0.02 3e+0 32 At5g04990 830381 sad1/unc-84 protein-related F:molecular_function unknown;P:biological_process unknown;C:nuclear envelope, endoplasmic reticulum;MOFBPA C.G. S.X.
0.02 3e+0 32 At5g47990 834850 CYP705A5 encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Glycine max Gma.5662.1.S1_at BM140147 - - 3e-5 At5g39950 ATTRX2 (THIOREDOXIN 2) C.G. S.X.
0.04 1e-1 36 Hordeum vulgare HV_CEa0010I04r2_s_at HV_CEa0010I04r2 - - 8e-1 At3g23715 SCRL13 (SCR-Like 13) C.G. S.X.
0.03 2e+0 34 Oryza sativa Os07g0588200 AK120511.1 - Actin-binding FH2 domain containing protein 9e-2 At5g54650 Fh5 (FORMIN HOMOLOGY5) C.G. S.X.
0.06 1e+0 34 Populus trichocarpa PtpAffx.44523.1.S1_a_at CV228960 thioredoxin h - 8e-2 At1g59730 ATH7 (thioredoxin H-type 7) C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.52427.1.S1_at CA707957 - - 2e-2 At1g03680 ATHM1 C.G. S.X.
0.05 1e-3 42 Vitis vinifera 1619796_at CF200774.1 - - 2e-58 At1g22780 PFL (POINTED FIRST LEAVES) C.G. S.X.
0.03 4e-1 34 Zea mays Zm.7569.1.A1_at BM347275 - - 1e+0 At1g69880 ATH8 (thioredoxin H-type 8) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0045454 Any process that maintains the redox environment of a cell or compartment within a cell.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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