CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g69810

Gene name WRKY36

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.64 78.9 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.61 76.7 At2g27000 817242 CYP705A8 member of CYP705A S.X. H.G.
0.56 73.0 At1g68150 843143 WRKY9 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.56 73.0 At3g53480 824516 PDR9 (PLEIOTROPIC DRUG RESISTANCE 9) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV S.X. H.G.
0.52 67.4 At1g50520 841474 CYP705A27 member of CYP705A S.X. H.G.
0.48 62.5 At3g20960 821646 CYP705A33 member of CYP705A S.X. H.G.
0.46 59.8 At5g39970 833994 catalytic F:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAF S.X. H.G.
0.40 50.8 At1g12160 837768 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA S.X. H.G.
0.39 48.4 At1g15210 838087 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane, chloroplast, membrane;BOMFAPV S.X. H.G.
0.39 48.4 At2g24610 816997 ATCNGC14 member of Cyclic nucleotide gated channel family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
61.5 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
58.5 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
55.1 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
49.9 99.8 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
49.5 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
48.9 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
47.7 99.8 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
43.1 99.8 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
42.4 99.8 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
42.0 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 6e-7 56 At4g01720 828001 WRKY47 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 2e-6 54 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 1e-5 52 At1g68150 843143 WRKY9 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.08 6e-4 46 At1g18860 838467 WRKY61 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 2e-3 44 At5g22570 832320 WRKY38 member of WRKY Transcription Factor; Group III C.G. S.X.
0.02 9e-3 42 At4g04450 825775 WRKY42 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 4e-2 40 At2g30250 817575 WRKY25 member of WRKY Transcription Factor; Group I. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. C.G. S.X.
0.02 1e-1 38 At1g80590 844398 WRKY66 member of WRKY Transcription Factor; Group III C.G. S.X.
0.02 6e-1 36 At5g62210 836342 embryo-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Glycine max GmaAffx.21523.2.S1_at BE021411 - - 2e-25 At4g04450 WRKY42 C.G. S.X.
0.03 3e-1 36 Hordeum vulgare AF146271_at AF146271 - - 1e-1 At1g69810 WRKY36 C.G. S.X.
0.03 1e+0 36 Oryza sativa OsAffx.27207.1.S1_at - - - 0 C.G. S.X.
0.04 1e-2 42 Populus trichocarpa PtpAffx.200578.1.S1_at pmrna1149 hypothetical protein - 6e-17 At1g68150 WRKY9 C.G. S.X.
0.03 1e-2 42 Triticum aestivum TaAffx.53644.1.S1_at CA690428 - - 7e-1 At5g52220 - C.G. S.X.
0.04 3e+0 32 Vitis vinifera 1619942_at CF568925 - - 3e+0 At3g57370 transcription factor IIB (TFIIB) family protein C.G. S.X.
0.02 4e+0 32 Zea mays Zm.9079.1.A1_at CN844993 hypothetical protein LOC100217287 - 6e-3 At1g13890 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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