Gene omics information

Query gene ID At1g69690
Gene name TCP family transcription factor, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2014.4At1g69690843305TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;PMOFBS.X.H.G.
0.2115.8At2g28950817444ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.S.X.H.G.
0.1710.2At4g34980829650SLP2Serine protease similar to subtilisin.S.X.H.G.
0.1710.2At5g11550831027bindingF:binding;P:biological_process unknown;C:chloroplast;PMFOBVS.X.H.G.
0.061.4At5g55730835667FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1)fasciclin-like arabinogalactan-protein 1 (Fla1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.499.6GSM242962Mock day 7 (day7E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
24.899.6GSM62697Columbia_stemGSE2848Auxin Response Factor mediated flower gene expression
22.899.6GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
22.199.6GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
21.499.6GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
21.299.6E-MEXP-265-raw-cel-414619318
19.299.6GSM62701arf6/arf6 ARF8/arf8_stemGSE2848Auxin Response Factor mediated flower gene expression
18.599.5E-MEXP-1246-raw-cel-1504120261
18.399.5E-MEXP-1246-raw-cel-1504120201
18.199.5E-MEXP-1246-raw-cel-1504120171
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.114e-1789At3g47620823916AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.C.G.S.X.
0.159e-1581At1g58100842177TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMOFC.G.S.X.
0.182e-963At1g35560840452TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;PMOFC.G.S.X.
0.103e-859At5g51910835266TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.041e-448At1g75550843891glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAC.G.S.X.
0.021e-448At1g13920837952remorin family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVC.G.S.X.
0.042e-344At5g55430835636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFVPBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Glycine maxHgAffx.23245.1.S1_s_atCD748678--4e+0At1g64840F-box family proteinC.G.S.X.
0.036e-238Hordeum vulgareHVSMEb0005M02r2_atHVSMEb0005M02r2--1e+1At3g23580RNR2A (RIBONUCLEOTIDE REDUCTASE 2A)C.G.S.X.
0.041e-346Oryza sativaOs08g04708009636.m03686--6e-4At4g33660unknown proteinC.G.S.X.
0.085e-1169Populus trichocarpaPtpAffx.159780.1.A1_atCV264397--3e-15At3g47620AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)C.G.S.X.
0.031e-138Triticum aestivumTaAffx.94630.1.S1_atCA728874--3e-1At3g55790unknown proteinC.G.S.X.
0.051e-136Vitis vinifera1621823_atCF214240hypothetical protein LOC100253216-4e+0At5g66000unknown proteinC.G.S.X.
0.035e-238Zea maysZmAffx.283.1.A1_atAI670414--3e+0At3g23175lesion inducing protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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