CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g69500

Gene name electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g69500 843283 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV S.X. H.G.
1.00 100.0 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF S.X. H.G.
1.00 100.0 At4g14080 827044 MEE48 (maternal effect embryo arrest 48) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO S.X. H.G.
0.94 96.7 At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. S.X. H.G.
0.94 96.7 At3g07450 819933 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.94 96.7 At3g42960 823352 ATA1 (ARABIDOPSIS TAPETUM 1) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells. S.X. H.G.
0.94 96.7 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.94 96.7 At4g20420 827790 tapetum-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.94 96.7 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF S.X. H.G.
0.94 96.7 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
296.7 100.0 E-MEXP-1592-raw-cel-1617526984
224.2 100.0 E-MEXP-1592-raw-cel-1617526920
210.4 100.0 E-MEXP-1592-raw-cel-1617526848
201.4 100.0 E-MEXP-1592-raw-cel-1617526824
174.6 100.0 E-MEXP-1592-raw-cel-1617526952
165.5 100.0 E-MEXP-1592-raw-cel-1617526976
154.8 99.9 E-MEXP-1592-raw-cel-1617526888
154.4 99.9 E-MEXP-849-raw-cel-1181980942
143.3 99.9 E-MEXP-1592-raw-cel-1617526856
135.7 99.9 GSM131578 ATGE_31_C2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 5e-2 40 At5g52320 835308 CYP96A4 member of CYP96A C.G. S.X.
0.01 5e-2 40 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A C.G. S.X.
0.01 5e-2 40 At2g23180 816850 CYP96A1 member of CYP96A C.G. S.X.
0.02 2e-1 38 At2g45510 819159 CYP704A2 member of CYP704A C.G. S.X.
0.01 2e-1 38 At2g17140 816219 - F:unknown;P:unknown;C:unknown;POFMBA C.G. S.X.
0.01 8e-1 36 At5g02900 831752 CYP96A13 member of CYP96A C.G. S.X.
0.01 8e-1 36 At5g23190 832383 CYP86B1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product C.G. S.X.
0.01 8e-1 36 At5g07780 830671 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MPOBFVA C.G. S.X.
0.01 8e-1 36 At5g07650 830658 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MOPFBA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 40 Glycine max Gma.4273.1.S1_at BM525286 - - 1e+0 At2g19290 unknown protein C.G. S.X.
0.04 4e-1 36 Hordeum vulgare HVSMEn0022N15r2_at HVSMEn0022N15r2 - - 3e-1 At1g69500 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding C.G. S.X.
0.06 1e-4 50 Oryza sativa Os04g0625300 AU172759 - Hypothetical protein 2e-1 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.34 2e-26 121 Populus trichocarpa PtpAffx.207866.1.S1_at pmrna15615 cytochrome P450 - 2e-26 At1g69500 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding C.G. S.X.
0.04 1e-5 52 Triticum aestivum TaAffx.92731.1.A1_at BJ250515 - - 5e-6 At1g69500 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding C.G. S.X.
0.03 4e+0 32 Vitis vinifera 1621885_at CK138210.1 - - 4e-16 At5g58860 CYP86A1 (CYTOCHROME P450 86 A1) C.G. S.X.
0.08 1e-3 44 Zea mays Zm.659.1.S1_at AF366297.1 hypothetical protein LOC100191749 - 4e-3 At1g69500 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010584 The formation of the pollen exine. The reticulate pollen wall pattern consists of two layers, exine and intine.
X GO:0080110 The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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