Gene omics information

Query gene ID At1g69400
Gene name transducin family protein / WD-40 repeat family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At1g69400843272transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPAS.X.H.G.
0.4659.8At5g05940830479ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.S.X.H.G.
0.4050.8At4g14970827156unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOBS.X.H.G.
0.3338.1At3g10880820258unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.157.8At3g17360820999POK1 (PHRAGMOPLAST ORIENTING KINESIN 1)PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At5g44390834465FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMAC.G.S.X.
0.015e-136At5g35390833500leucine-rich repeat transmembrane protein kinase, putativeEncodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.C.G.S.X.
0.035e-136At1g72750843607ATTIM23-2F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport;C:mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane;MFPOC.G.S.X.
0.025e-136At1g64295842735F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At5g20450832167-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPFAVC.G.S.X.
0.012e+034At5g46190834661KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBC.G.S.X.
0.012e+034At5g17490831615RGL3 (RGA-LIKE PROTEIN 3)DELLA subfamily member involved in GA signal transductionC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxGmaAffx.657.1.A1_atBU548986--8e-5At5g03900-C.G.S.X.
0.034e+032Hordeum vulgareHVSMEm0008I05r2_atHVSMEm0008I05r2--1e-1At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)C.G.S.X.
0.034e+034Oryza sativaOs.54489.1.S1_at---0C.G.S.X.
0.091e-552Populus trichocarpaPtpAffx.150555.1.S1_atBI138088hypothetical protein-4e-6At1g69400transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.038e+032Triticum aestivumTaAffx.83103.1.S1_s_atCA662020--2e-1At5g13500unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1620842_atCB345023--2e+0At3g15351unknown proteinC.G.S.X.
0.033e+032Zea maysZm.2785.1.A1_atCF004244major Facilitator superfamily protein-2e-11At4g27720-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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