Gene omics information

Query gene ID At1g68940
Gene name armadillo/beta-catenin repeat protein-related / U-box domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At1g68940843228armadillo/beta-catenin repeat protein-related / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMBFVS.X.H.G.
0.8793.5At2g28970817446leucine-rich repeat protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.7788.0At1g07560837270leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.6781.6At5g07390830630ATRBOHA (respiratory burst oxidase homolog A)F:calcium ion binding;P:defense response;C:intrinsic to plasma membrane;MFPOBAS.X.H.G.
0.6478.9At4g37340829889CYP81D3member of CYP81DS.X.H.G.
0.6176.7At2g28990817448leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.5974.7At4g11230826725respiratory burst oxidase, putative / NADPH oxidase, putativeF:in 6 functions;P:oxidation reduction;C:integral to membrane, membrane;MFPBOAS.X.H.G.
0.5166.3At1g73270843661scpl6 (serine carboxypeptidase-like 6)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOS.X.H.G.
0.5065.3At4g38830830038protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.4862.5At1g18860838467WRKY61member of WRKY Transcription Factor; Group II-bS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
146.699.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
128.199.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
127.799.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
124.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
115.999.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
114.599.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
102.399.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
97.999.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
96.499.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.299.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.075e-56220At1g68935843227unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.013e-242At1g09090837430ATRBOHB (respiratory burst oxidase homolog B)F:in 7 functions;P:response to heat, defense response;C:integral to membrane, membrane;MPFOBAC.G.S.X.
0.011e-140At5g65500836676ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligaseF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;PMOBFVAC.G.S.X.
0.014e-138At5g60120836134TOE2F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POBVC.G.S.X.
0.014e-138At2g20580816580RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A)encoding the RPN subunits of the 26S proteasomeC.G.S.X.
0.014e-138At2g261352745561zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:membrane;MFOPVC.G.S.X.
0.014e-138At1g31480840038SGR2 (SHOOT GRAVITROPISM 2)encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.C.G.S.X.
0.014e-138At1g63520842657unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-140Glycine maxGmaAffx.91442.1.S1_atCF805736stress-induced protein SAM22-like /// pathogenesis-related protein PR-10-1e-1At4g32950protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.015e-240Hordeum vulgareHB11I22r_atHB11I22r--3e+0At5g51220ubiquinol-cytochrome C chaperone family proteinC.G.S.X.
0.013e+036Oryza sativaOs05g02721019633.m01711--1e-1At2g27390proline-rich family proteinC.G.S.X.
0.062e-656Populus trichocarpaPtpAffx.209011.1.S1_atpmrna17851hypothetical protein-2e-6At1g68940armadillo/beta-catenin repeat protein-related / U-box domain-containing proteinC.G.S.X.
0.013e-242Triticum aestivumTaAffx.29103.1.S1_atCA650212--1e+0At4g30620unknown proteinC.G.S.X.
0.012e+034Vitis vinifera1607066_atCB339448--6e+0At5g50830unknown proteinC.G.S.X.
0.012e-138Zea maysZm.4869.1.S1_atCF637217hypothetical protein LOC100193077-4e-21At3g07050GTP-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0016567The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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