Gene omics information

Query gene ID At1g68810
Gene name basic helix-loop-helix (bHLH) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At1g68810843213basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOBS.X.H.G.
0.6781.6At3g48185823974unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At4g32880829424ATHB-8 (HOMEOBOX GENE 8)member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.S.X.H.G.
0.4050.8At2g04850815031auxin-responsive protein-relatedF:unknown;P:unknown;C:membrane;PMFOBS.X.H.G.
0.1710.2At2g38320818412unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
356.3100.0GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
250.0100.0GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
228.1100.0GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
198.9100.0GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
151.899.9GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
150.099.9GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
137.899.9GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
112.499.9GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
54.899.8GSM184920Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
54.699.8GSM184919Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.121e-1481At3g25710822159BHLH32 (BASIC HELIX-LOOP-HELIX 32)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.014e-240At5g46830834727basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMOC.G.S.X.
0.024e-240At3g09770820135zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:plasma membrane;MPOFVBAC.G.S.X.
0.021e-138At5g53870835468plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVAC.G.S.X.
0.031e-138At5g43250834343NF-YC13 (NUCLEAR FACTOR Y, SUBUNIT C13)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFOC.G.S.X.
0.021e-138At5g40610834060glycerol-3-phosphate dehydrogenase (NAD+) / GPDHF:in 9 functions;P:oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process;C:chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm;BOMFPAC.G.S.X.
0.011e-138At3g04440819599unknown proteinF:unknown;P:biological_process unknown;C:unknown;PFOMC.G.S.X.
0.011e-138At3g03700821183unknown proteinF:unknown;P:biological_process unknown;C:unknown;PFOMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242Glycine maxGmaAffx.23899.1.S1_atBM891498--5e-2At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)C.G.S.X.
0.022e-240Hordeum vulgareContig23928_atContig23928--2e-2At5g28630glycine-rich proteinC.G.S.X.
0.032e-242Oryza sativaOsAffx.5823.1.S1_at---0C.G.S.X.
0.222e-1067Populus trichocarpaPtpAffx.208977.1.S1_atpmrna17790hypothetical protein-2e-10At1g68810basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.78140.1.S1_atCA737007--2e+0At2g26020PDF1.2b (plant defensin 1.2b)C.G.S.X.
0.022e-136Vitis vinifera1613651_atCB348803hypothetical protein LOC100266045-1e-3At5g07050-C.G.S.X.
0.032e-136Zea maysZm.17490.1.A1_a_atBG840791helix-loop-helix DNA-binding domain containing protein-2e-8At2g43140DNA binding / transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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