CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g68540

Gene name oxidoreductase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g68540 843183 oxidoreductase family protein F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
0.96 97.3 At3g23770 821959 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO S.X. H.G.
0.96 97.3 At3g13220 820512 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV S.X. H.G.
0.95 97.0 At4g29980 829121 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.94 96.7 At1g75030 843841 ATLP-3 encodes a PR5-like protein S.X. H.G.
0.94 96.7 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM S.X. H.G.
0.94 96.7 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV S.X. H.G.
0.94 96.7 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF S.X. H.G.
0.94 96.7 At2g42940 818895 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:chloroplast;PBO S.X. H.G.
0.93 96.4 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
179.1 100.0 E-MEXP-1592-raw-cel-1617526848
168.2 100.0 E-MEXP-1592-raw-cel-1617526984
157.3 99.9 GSM131577 ATGE_31_B2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
142.7 99.9 E-MEXP-1592-raw-cel-1617526920
139.8 99.9 E-MEXP-1592-raw-cel-1617526824
139.0 99.9 E-MEXP-1592-raw-cel-1617526888
137.8 99.9 E-MEXP-1592-raw-cel-1617526816
136.2 99.9 GSM131576 ATGE_31_A2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
135.5 99.9 GSM131578 ATGE_31_C2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
129.8 99.9 E-MEXP-1592-raw-cel-1617526952
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.44 3e-24 113 At1g25460 839132 oxidoreductase family protein F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process, flavonoid biosynthetic process;C:cellular_component unknown;BOPFMAV C.G. S.X.
0.03 8e-3 42 At5g19440 832064 cinnamyl-alcohol dehydrogenase, putative (CAD) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase C.G. S.X.
0.02 1e-1 38 At5g61865 836308 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPAF C.G. S.X.
0.01 1e-1 38 At3g13470 820549 chaperonin, putative F:protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:in 7 components;BOMFPAV C.G. S.X.
0.01 1e-1 38 At1g55490 841996 CPN60B (CHAPERONIN 60 BETA) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro. C.G. S.X.
0.02 1e-1 38 At1g09490 837474 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase; Location of EST gb:H37170, gb:H77227 and gb:AA605565 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-15 83 Glycine max Gma.16669.1.S1_at CD415625 - - 3e-15 At1g68540 oxidoreductase family protein C.G. S.X.
0.03 4e+0 32 Hordeum vulgare Contig9232_at Contig9232 - - 2e+0 At5g11160 APT5 (Adenine phosphoribosyltransferase 5) C.G. S.X.
0.02 2e-1 38 Oryza sativa Os01g0892600 AK104609.1 - Pectinacetylesterase family protein 3e+0 At4g19420 pectinacetylesterase family protein C.G. S.X.
0.25 1e-17 91 Populus trichocarpa PtpAffx.145232.1.A1_at CV242405 hypothetical protein - 9e-18 At1g68540 oxidoreductase family protein C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.22478.1.S1_at CA746420 - - 8e-1 At1g68540 oxidoreductase family protein C.G. S.X.
0.06 2e-3 42 Vitis vinifera 1607159_at BQ793135 hypothetical protein LOC100257863 - 2e-8 At1g25460 oxidoreductase family protein C.G. S.X.
0.03 2e-1 36 Zea mays Zm.16369.1.S1_at BU051016 - - 3e+0 At1g80920 J8 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
L GO:0044237 The chemical reactions and pathways by which individual cells transform chemical substances.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00064 The cinnamate-monolignol pathway/sinapoyl ester biosynthesis

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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