CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g68380

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.36 43.6 At1g68380 843167 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.86 93.1 At5g07500 830642 PEI1 Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation. S.X. H.G.
0.84 91.9 At4g34520 829603 KCS18 Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). S.X. H.G.
0.82 90.9 At1g18100 838390 E12A11 E12A11 protein (E12A11) S.X. H.G.
0.82 90.9 At1g65880 842900 BZO1 (BENZOYLOXYGLUCOSINOLATE 1) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds. S.X. H.G.
0.82 90.9 At5g49190 834978 SUS2 (SUCROSE SYNTHASE 2) Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency. S.X. H.G.
0.78 88.6 At3g44460 823571 DPBF2 basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons. S.X. H.G.
0.75 86.9 At4g25980 828704 cationic peroxidase, putative F:peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOM S.X. H.G.
0.58 73.8 At5g09640 830823 SCPL19 encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase. S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
681.6 100.0 GSM10451 WT Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
349.5 100.0 GSM10453 WT Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
260.0 100.0 E-ATMX-1-raw-cel-1112746209
223.6 100.0 E-ATMX-1-raw-cel-1112746154
212.3 100.0 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
212.0 100.0 E-ATMX-1-raw-cel-1112746267
210.1 100.0 GSM131695 ATGE_79_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
187.6 100.0 E-ATMX-1-raw-cel-1112746095
185.7 100.0 GSM131696 ATGE_79_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
181.3 100.0 GSM131694 ATGE_79_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.31 1e-41 171 At1g68390 843168 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMVB C.G. S.X.
0.08 1e-8 61 At1g73810 843717 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.04 4e-2 40 At5g25990 832668 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P C.G. S.X.
0.02 4e-2 40 At2g18640 816379 GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4) Encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase C.G. S.X.
0.03 4e-2 40 At1g10880 837631 unknown protein F:unknown;P:unknown;C:cellular_component unknown;POMFB C.G. S.X.
0.02 1e-1 38 At1g62305 842528 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB C.G. S.X.
0.02 1e-1 38 At1g51770 841603 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-1 38 Glycine max Gma.789.1.S1_at AW133480 - - 6e-4 At3g21310 unknown protein C.G. S.X.
0.02 1e-3 44 Hordeum vulgare Contig9016_at Contig9016 - - 9e-7 At5g22070 unknown protein C.G. S.X.
0.06 7e-2 40 Oryza sativa OsAffx.1927.1.S1_at - - - 0 C.G. S.X.
0.11 6e-11 69 Populus trichocarpa PtpAffx.212673.1.S1_at pmrna24790 hypothetical protein - 3e-11 At1g68380 unknown protein C.G. S.X.
0.02 6e-1 36 Triticum aestivum TaAffx.85598.1.S1_at CA621232 - - 3e-1 At1g62333 unknown protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1617980_at CB346475 - - 8e-1 At5g66800 unknown protein C.G. S.X.
0.03 3e-4 46 Zea mays Zm.13663.1.A1_at AY107102.1 hypothetical protein LOC100276526 - 2e-7 At5g11730 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage