CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g68320

Gene name MYB62 (myb domain protein 62)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.73 85.5 At1g68320 843161 MYB62 (myb domain protein 62) putative transcription factor: R2R3-MYB transcription family S.X. H.G.
0.60 75.7 At2g28690 817418 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.57 73.8 At3g25640 822151 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.50 65.3 At1g25340 839118 MYB116 (myb domain protein 116) putative transcription factor (MYB116) S.X. H.G.
0.40 50.8 At1g71050 843445 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFBM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
752.0 100.0 E-MEXP-1474-raw-cel-1593932929
649.9 100.0 E-MEXP-1474-raw-cel-1593932865
510.2 100.0 E-MEXP-1474-raw-cel-1593932801
479.2 100.0 E-MEXP-1474-raw-cel-1593932769
460.5 100.0 E-MEXP-1474-raw-cel-1593932897
408.9 100.0 E-MEXP-1474-raw-cel-1593932833
385.3 100.0 E-MEXP-1474-raw-cel-1593932737
303.9 100.0 E-MEXP-1474-raw-cel-1593932641
150.0 99.9 E-MEXP-1474-raw-cel-1593932705
128.3 99.9 E-MEXP-1474-raw-cel-1593932545
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.41 2e-70 266 At1g25340 839118 MYB116 (myb domain protein 116) putative transcription factor (MYB116) C.G. S.X.
0.09 5e-22 105 At5g49620 835024 AtMYB78 (myb domain protein 78) Member of the R2R3 factor gene family. C.G. S.X.
0.06 1e-10 67 At3g27920 822415 ATMYB0 (MYB DOMAIN PROTEIN 0) Encodes a Myb-like protein that is required for induction of trichome development. C.G. S.X.
0.07 5e-10 65 At1g22640 838870 MYB3 (MYB DOMAIN PROTEIN 3) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression C.G. S.X.
0.13 5e-10 65 At1g48000 841218 MYB112 (myb domain protein 112) Encodes a putative transcription factor (MYB112). C.G. S.X.
0.12 2e-9 63 At4g13480 826980 AtMYB79 (myb domain protein 79) Member of the R2R3 factor gene family. C.G. S.X.
0.07 3e-8 59 At3g06490 819827 MYB108 (myb domain protein 108) putative transcription factor MYB108 (MYB108) mRNA, C.G. S.X.
0.07 1e-7 57 At3g02940 821178 MYB107 (myb domain protein 107) Encodes a putative transcription factor (MYB107). C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-6 54 Glycine max Gma.18049.2.S1_a_at BI975051 MYB transcription factor MYB184 /// MYB transcription factor MYB84 - 9e-7 At1g68320 MYB62 (myb domain protein 62) C.G. S.X.
0.04 5e-2 38 Hordeum vulgare Contig16237_at Contig16237 - - 2e-9 At1g68720 TADA (TRNA ARGININE ADENOSINE DEAMINASE) C.G. S.X.
0.06 9e-4 46 Oryza sativa Os11g0684000 AY026332.1 - Myb, DNA-binding domain containing protein 8e-7 At3g01530 AtMYB57 (myb domain protein 57) C.G. S.X.
0.26 2e-28 127 Populus trichocarpa PtpAffx.208944.1.S1_at pmrna17720 hypothetical protein - 8e-29 At1g68320 MYB62 (myb domain protein 62) C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.95676.1.S1_at BE445977 - - 6e-1 At4g18450 ethylene-responsive factor, putative C.G. S.X.
0.09 1e-1 36 Vitis vinifera 1619579_at AB073014.1 - - 4e-13 At1g22640 MYB3 (MYB DOMAIN PROTEIN 3) C.G. S.X.
0.07 5e-2 38 Zea mays Zm.12696.1.S1_at CD965876 hypothetical protein LOC100272660 - 2e-16 At3g46130 MYB111 (MYB DOMAIN PROTEIN 111) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009751 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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