Gene omics information

Query gene ID At1g68270
Gene name AMP-dependent synthetase and ligase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g68270843156AMP-dependent synthetase and ligase family proteinF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.7888.6At5g66370836769unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFS.X.H.G.
0.7687.4At2g32050817765cell cycle control protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.7586.9At1g59630842253F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7284.8At2g24410816977-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.7184.2At2g20616816587unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.7184.2At4g21950828284unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7083.5At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.7083.5At2g30430817594unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6982.9At1g54470841889RPP27 (resistance to Peronospora parasitica 27)Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
364.0100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
330.6100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
322.6100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
308.0100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
290.9100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
288.4100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
278.7100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
274.7100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
271.4100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
269.6100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.820783At1g65890842901AAE12 (ACYL ACTIVATING ENZYME 12)F:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.820735At1g65880842900BZO1 (BENZOYLOXYGLUCOSINOLATE 1)Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.C.G.S.X.
0.565e-67256At1g66120842926acyl-activating enzyme 11 (AAE11)F:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.041e-242At3g16910820946AAE7 (ACYL-ACTIVATING ENZYME 7)Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.C.G.S.X.
0.025e-240At4g04840825821methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;BOMPFAVC.G.S.X.
0.015e-240At1g21530838754AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-240Glycine maxGmaAffx.74080.1.S1_atAW156663--6e-3At1g65890AAE12 (ACYL ACTIVATING ENZYME 12)C.G.S.X.
0.022e+034Hordeum vulgareContig8425_atContig8425--3e-1At4g17540unknown proteinC.G.S.X.
0.022e+036Oryza sativaOs05g02152009633.m01110--8e-1At5g60680unknown proteinC.G.S.X.
0.082e-242Populus trichocarpaPtpAffx.32362.1.S1_atCV242633acyl:coa ligase acetate-coa synthetase-like protein-2e-2At1g68270AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.023e+034Triticum aestivumTaAffx.84501.1.S1_atCA635543--1e+0At1g68270AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.014e+032Vitis vinifera1620540_atCF514642--5e-3At3g57730protein kinase, putativeC.G.S.X.
0.025e+032Zea maysZmAffx.754.1.A1_atAI745921--2e-1At1g33960AIG1 (AVRRPT2-INDUCED GENE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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