CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g67270

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g67270 843047 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFB S.X. H.G.
0.97 97.6 At2g37610 818338 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.95 97.0 At1g65170 842824 ubiquitin carboxyl-terminal hydrolase family protein F:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PMO S.X. H.G.
0.91 95.6 At5g17950 831662 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.90 95.1 At1g23910 839002 - F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.89 94.6 At2g25990 817140 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
0.88 94.0 At1g23610 838971 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.88 94.0 At4g02910 828141 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.88 94.0 At2g01310 814659 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.87 93.5 At2g01780 814709 S-locus glycoprotein, putative F:sugar binding;P:recognition of pollen;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
410.7 100.0 E-MEXP-509-raw-cel-829148561
362.5 100.0 E-MEXP-509-raw-cel-829148348
304.0 100.0 E-MEXP-509-raw-cel-829148420
251.3 100.0 E-MEXP-509-raw-cel-829148456
214.3 100.0 E-MEXP-509-raw-cel-829148129
205.1 100.0 E-MEXP-509-raw-cel-829148492
193.3 100.0 E-MEXP-509-raw-cel-829148525
180.9 100.0 E-MEXP-509-raw-cel-829148632
153.0 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
152.4 99.9 E-MEXP-509-raw-cel-829148597
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.78 0 983 At1g67780 843103 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO C.G. S.X.
0.11 4e-15 83 At5g38690 833859 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAV C.G. S.X.
0.02 2e-1 38 At5g28610 832960 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB C.G. S.X.
0.01 2e-1 38 At5g49110 834970 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPV C.G. S.X.
0.01 2e-1 38 At1g48410 841262 AGO1 (ARGONAUTE 1) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Glycine max Gma.6009.1.S1_at BM527363 - - 2e-3 At1g28370 ERF11 (ERF DOMAIN PROTEIN 11) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig1987_s_at Contig1987 - - 5e-6 At3g45030 40S ribosomal protein S20 (RPS20A) C.G. S.X.
0.01 2e+0 36 Oryza sativa Os05g0576850 9633.m04714 - - 1e-1 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
0.03 7e-2 40 Populus trichocarpa PtpAffx.214212.1.S1_at pmrna27656 hypothetical protein - 9e-13 At5g38690 - C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.80578.1.S1_at CA695049 - - 3e-1 At1g75930 EXL6 C.G. S.X.
0.01 2e-1 36 Vitis vinifera 1621071_at CA811292 hypothetical LOC100245839 - 4e-48 At2g32260 cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative C.G. S.X.
0.02 1e+0 34 Zea mays ZmAffx.938.1.S1_at AI820264 - - 3e+0 At3g21400 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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